Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CFTRP13569 NDUFB9P3-201ENST00000521269 501 ntBASIC5.67□□□□□ -1.5
CFTRP13569 AC006518.1-201ENST00000541449 943 ntBASIC5.67□□□□□ -1.5
CFTRP13569 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.67□□□□□ -1.5
CFTRP13569 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.67□□□□□ -1.5
CFTRP13569 OR51C1P-201ENST00000608504 942 ntBASIC5.67□□□□□ -1.5
CFTRP13569 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.67□□□□□ -1.5
CFTRP13569 AC068647.1-201ENST00000489539 2265 ntBASIC5.67□□□□□ -1.5
CFTRP13569 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CFTRP13569 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CFTRP13569 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFTRP13569 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFTRP13569 AC018529.3-201ENST00000624212 2254 ntBASIC5.66□□□□□ -1.5
CFTRP13569 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFTRP13569 RNA5SP235-201ENST00000365411 114 ntBASIC5.66□□□□□ -1.5
CFTRP13569 RN7SKP97-201ENST00000410966 333 ntBASIC5.66□□□□□ -1.5
CFTRP13569 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.66□□□□□ -1.5
CFTRP13569 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.66□□□□□ -1.5
CFTRP13569 SETP5-201ENST00000437270 562 ntBASIC5.66□□□□□ -1.5
CFTRP13569 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.66□□□□□ -1.5
CFTRP13569 RPL31P50-201ENST00000471002 296 ntBASIC5.66□□□□□ -1.5
CFTRP13569 S100A11P1-201ENST00000477525 312 ntBASIC5.66□□□□□ -1.5
CFTRP13569 AP002404.1-201ENST00000532005 451 ntBASIC5.66□□□□□ -1.5
CFTRP13569 AC007998.5-201ENST00000622938 237 ntBASIC5.66□□□□□ -1.5
CFTRP13569 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.66□□□□□ -1.5
CFTRP13569 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.66□□□□□ -1.5
CFTRP13569 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFTRP13569 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CFTRP13569 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.65□□□□□ -1.5
CFTRP13569 RHOT1P2-201ENST00000366423 333 ntBASIC5.65□□□□□ -1.5
CFTRP13569 ARF4P3-201ENST00000397387 509 ntBASIC5.65□□□□□ -1.5
CFTRP13569 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.65□□□□□ -1.5
CFTRP13569 VN1R104P-201ENST00000505115 1009 ntBASIC5.65□□□□□ -1.5
CFTRP13569 AC010486.1-201ENST00000511793 424 ntBASIC5.65□□□□□ -1.5
CFTRP13569 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.65□□□□□ -1.5
CFTRP13569 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.65□□□□□ -1.5
CFTRP13569 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CFTRP13569 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CFTRP13569 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.65□□□□□ -1.5
CFTRP13569 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CFTRP13569 AC139713.2-215ENST00000641428 5037 ntBASIC5.65□□□□□ -1.5
CFTRP13569 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CFTRP13569 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CFTRP13569 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CFTRP13569 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CFTRP13569 AC006989.1-201ENST00000427212 131 ntBASIC5.64□□□□□ -1.51
CFTRP13569 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.64□□□□□ -1.51
CFTRP13569 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.64□□□□□ -1.51
CFTRP13569 AC233982.1-201ENST00000451247 436 ntBASIC5.64□□□□□ -1.51
CFTRP13569 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.64□□□□□ -1.51
CFTRP13569 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.64□□□□□ -1.51
CFTRP13569 BRDTP1-201ENST00000605735 677 ntBASIC5.64□□□□□ -1.51
CFTRP13569 AL157817.1-201ENST00000614264 790 ntBASIC5.64□□□□□ -1.51
CFTRP13569 SNORD39.4-201ENST00000620099 78 ntBASIC5.64□□□□□ -1.51
CFTRP13569 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.64□□□□□ -1.51
CFTRP13569 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.64□□□□□ -1.51
CFTRP13569 AL137790.1-201ENST00000634283 177 ntBASIC5.64□□□□□ -1.51
CFTRP13569 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CFTRP13569 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CFTRP13569 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CFTRP13569 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.64□□□□□ -1.51
CFTRP13569 LINC02471-203ENST00000641941 4752 ntBASIC5.64□□□□□ -1.51
CFTRP13569 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.64□□□□□ -1.51
CFTRP13569 BTF3L4P4-201ENST00000506381 449 ntBASIC5.64□□□□□ -1.51
CFTRP13569 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.64□□□□□ -1.51
CFTRP13569 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.64□□□□□ -1.51
CFTRP13569 AL353600.1-201ENST00000608148 251 ntBASIC5.64□□□□□ -1.51
CFTRP13569 AL158062.1-201ENST00000619632 745 ntBASIC5.64□□□□□ -1.51
CFTRP13569 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.64□□□□□ -1.51
CFTRP13569 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CFTRP13569 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CFTRP13569 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CFTRP13569 CEP170P1-201ENST00000502249 4587 ntBASIC5.63□□□□□ -1.51
CFTRP13569 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CFTRP13569 AL139281.1-201ENST00000422120 335 ntBASIC5.63□□□□□ -1.51
CFTRP13569 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CFTRP13569 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.63□□□□□ -1.51
CFTRP13569 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CFTRP13569 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.63□□□□□ -1.51
CFTRP13569 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CFTRP13569 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CFTRP13569 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CFTRP13569 PTP4A1P3-201ENST00000433661 420 ntBASIC5.62□□□□□ -1.51
CFTRP13569 HMGB3P22-202ENST00000451823 572 ntBASIC5.62□□□□□ -1.51
CFTRP13569 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.62□□□□□ -1.51
CFTRP13569 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 AL356321.1-201ENST00000621360 228 ntBASIC5.62□□□□□ -1.51
CFTRP13569 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 SAGE4P-201ENST00000442271 3381 ntBASIC5.62□□□□□ -1.51
CFTRP13569 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CFTRP13569 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.62□□□□□ -1.51
CFTRP13569 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CFTRP13569 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CFTRP13569 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.61□□□□□ -1.51
CFTRP13569 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CFTRP13569 OR5J1P-201ENST00000313544 939 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms