Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 ATP5F1P1-201ENST00000433775 569 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC234064.1-201ENST00000436312 247 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 RPL23AP37-201ENST00000479658 549 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 RPS6P4-201ENST00000494693 758 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC112198.1-201ENST00000505369 1220 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 HMGB3P16-201ENST00000508037 287 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC091965.2-201ENST00000512324 613 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 Y_RNA.695-201ENST00000516715 107 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 MIR4801-201ENST00000582704 82 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC020910.2-201ENST00000603635 610 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AP000238.1-201ENST00000608759 426 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC008083.4-201ENST00000615076 444 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC114781.5-201ENST00000615297 108 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC090017.1-201ENST00000548612 1779 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC087359.1-201ENST00000508335 1740 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC009951.1-201ENST00000623674 2614 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AP000756.2-201ENST00000624168 2567 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 MAPK10-320ENST00000641462 6696 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC138393.1-206ENST00000540997 1886 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 RN7SKP227-201ENST00000364445 330 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 OR1L1-202ENST00000373686 1083 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AL031577.2-201ENST00000404133 280 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 RAD23BP1-201ENST00000421404 1227 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 RPS24P1-201ENST00000438550 371 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 ACTR3P2-201ENST00000439585 1257 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC012671.1-201ENST00000451912 203 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 CYCSP34-201ENST00000458172 304 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 SRRM1P2-201ENST00000464531 1192 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC053481.1-201ENST00000467217 306 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC021205.1-201ENST00000468797 348 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC091959.2-201ENST00000477363 321 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 NCOR1P1-202ENST00000486162 291 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AL024509.2-201ENST00000493462 493 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC005178.1-201ENST00000508392 440 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 NRON-201ENST00000517270 370 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC092747.2-201ENST00000545069 983 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AP000619.2-201ENST00000546014 969 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AL359219.2-201ENST00000555184 348 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC044913.1-201ENST00000557200 430 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC012435.1-202ENST00000568772 240 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC015912.2-201ENST00000571053 181 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 MIR3611-201ENST00000584484 83 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AP001542.2-201ENST00000593141 364 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 IPO5P1-202ENST00000600039 287 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 WISP1-OT1-201ENST00000602893 642 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC018755.4-201ENST00000619715 454 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOAP06340 AC024595.1-201ENST00000623088 387 ntBASIC5.32□□□□□ -1.56
HLA-DOAP06340 MIR4278-201ENST00000636094 69 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms