Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 CYP1D1P-201ENST00000416662 1433 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC110792.3-201ENST00000595906 1614 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AL513302.2-201ENST00000562313 1842 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DQB2P05538 MTND4P10-201ENST00000446199 1363 ntBASIC3.51□□□□□ -1.85
HLA-DQB2P05538 AC032011.1-201ENST00000611703 1549 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AP001486.2-201ENST00000561652 5113 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 PNPT1P2-201ENST00000456768 2050 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 RPL21P110-201ENST00000433345 446 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 Z95327.1-201ENST00000446082 482 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 MRPS31P2-201ENST00000451581 518 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 RPS4XP2-201ENST00000458402 793 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AP001960.1-201ENST00000506494 658 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC106785.3-201ENST00000564064 847 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC110741.2-201ENST00000605278 268 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 PHKBP1-201ENST00000450951 1951 ntBASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DQB2P05538 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AL122126.1-201ENST00000546905 1318 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 RNA5SP197-201ENST00000363357 119 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 MIR218-2-201ENST00000385006 110 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 RSL24D1P1-201ENST00000404972 493 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 Z99755.1-201ENST00000414048 380 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 RPS15AP29-201ENST00000445539 400 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 S100A11P1-201ENST00000477525 312 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 SNORA70.19-201ENST00000516717 90 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 IGHV3-32-201ENST00000519182 355 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 OR8I1P-201ENST00000529291 931 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 RFPL1S-203ENST00000539579 330 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 SNORA51-201ENST00000606420 132 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 OR6R2P-201ENST00000609216 300 ntBASIC3.49□□□□□ -1.85
HLA-DQB2P05538 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQB2P05538 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 RNU6-697P-201ENST00000363348 107 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 RN7SKP44-201ENST00000363602 316 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC245052.5-201ENST00000416320 649 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 AC093084.1-201ENST00000424233 687 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQB2P05538 RPS26P40-201ENST00000435209 294 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 ELOCP10-201ENST00000440624 327 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 MTCYBP21-201ENST00000443300 1113 ntBASIC3.48□□□□□ -1.85
HLA-DQB2P05538 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms