Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 AL136984.1-201ENST00000607611 1893 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDGFAP04085 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 AC104837.1-201ENST00000444644 1587 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 AC011978.2-201ENST00000569835 2054 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
PDGFAP04085 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AC097461.1-201ENST00000568928 2821 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AC067945.1-201ENST00000342609 618 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 Y_RNA.259-201ENST00000364619 101 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 SNORD82-201ENST00000365530 70 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 Y_RNA.422-201ENST00000384054 114 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 RN7SKP206-201ENST00000410823 293 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 HMGN1P20-201ENST00000411849 300 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 MTCO2P27-201ENST00000420740 428 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AC094019.1-201ENST00000434678 472 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 EEF1A1P1-201ENST00000447052 739 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 NOP56P2-201ENST00000447491 769 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 AC130509.1-201ENST00000464158 433 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 RPL21P99-201ENST00000480369 423 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 RPL12P30-201ENST00000488389 499 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC026826.1-201ENST00000493002 361 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 IGBP1P4-201ENST00000503202 879 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 FTH1P24-201ENST00000503502 462 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 AC091965.3-201ENST00000506236 208 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC091885.1-201ENST00000506658 268 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 TRMT10BP1-201ENST00000519377 943 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 OR4P1P-201ENST00000530808 1136 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 MRPS21P8-201ENST00000569196 235 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 RN7SL208P-201ENST00000577964 296 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.97□□□□□ -1.45
PDGFAP04085 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.97□□□□□ -1.45
PDGFAP04085 AC073046.2-201ENST00000604756 527 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC245517.5-201ENST00000611529 162 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 MIR4302-201ENST00000638058 60 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.97□□□□□ -1.45
PDGFAP04085 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 AC005332.9-201ENST00000620266 2921 ntBASIC5.97□□□□□ -1.45
PDGFAP04085 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PDGFAP04085 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDGFAP04085 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDGFAP04085 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.96□□□□□ -1.45
PDGFAP04085 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
PDGFAP04085 AC020658.2-201ENST00000559030 4020 ntBASIC5.96□□□□□ -1.45
PDGFAP04085 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.45
PDGFAP04085 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDGFAP04085 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
PDGFAP04085 Y_RNA.132-201ENST00000363421 102 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 RNU1-130P-201ENST00000363930 160 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 U3.11-201ENST00000364476 212 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 SNORA4.3-201ENST00000365564 137 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 RNU6-39P-201ENST00000384344 107 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 MIR558-201ENST00000384920 94 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AP003170.5-201ENST00000397185 335 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFAP04085 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.46
PDGFAP04085 FTH1P1-201ENST00000437933 532 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 HLA-DPA3-207ENST00000454398 229 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFAP04085 AL590639.1-201ENST00000456484 337 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 UBFD1P1-201ENST00000473259 814 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms