Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN9O95484 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CLDN9O95484 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN9O95484 AC022031.1-201ENST00000585985 2593 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 DCAF13P3-201ENST00000561147 1334 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 NCAPGP1-201ENST00000505112 1814 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC095050.2-201ENST00000510748 1458 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLDN9O95484 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN9O95484 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 MIR23B-201ENST00000384832 97 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 MIR1193-201ENST00000408109 78 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN9O95484 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN9O95484 Z97055.1-201ENST00000419730 712 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN9O95484 OR5AW1P-201ENST00000426334 1006 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 RPL7P28-201ENST00000437739 740 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC092809.1-201ENST00000441469 474 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC098824.1-201ENST00000453565 980 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 DNAJC19P1-201ENST00000455312 319 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 RPS7P7-201ENST00000463499 571 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 RPL7P19-201ENST00000469948 618 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 PPIAP15-201ENST00000479662 484 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN9O95484 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN9O95484 AC005798.1-201ENST00000513715 387 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC103833.1-201ENST00000517442 172 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC008562.1-201ENST00000521763 330 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 OR5AK3P-201ENST00000527486 1297 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN9O95484 RFPL1S-203ENST00000539579 330 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN9O95484 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN9O95484 AC233266.2-201ENST00000567067 528 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 HMGB1P50-201ENST00000605814 607 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AP003117.2-201ENST00000606010 545 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 MIR6867-201ENST00000610636 67 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AC023043.4-201ENST00000612081 449 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 AL392048.1-201ENST00000613946 534 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN9O95484 AL359715.5-201ENST00000623431 443 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN9O95484 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN9O95484 AC138393.1-206ENST00000540997 1886 ntBASIC3.75□□□□□ -1.81
CLDN9O95484 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 RNU6-252P-201ENST00000363232 107 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 Y_RNA.126-201ENST00000363382 111 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 RNA5SP322-201ENST00000363617 119 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 SNORA70C-201ENST00000384538 135 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 SNORA48.7-201ENST00000391302 135 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 HMGN2P8-201ENST00000391458 268 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 RPL21P65-201ENST00000406094 466 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 FTH1P6-201ENST00000430768 320 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN9O95484 PTP4A1P3-201ENST00000433661 420 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 HMGB1P16-201ENST00000447155 540 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 RPL5P32-201ENST00000454085 879 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CLDN9O95484 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 AC090071.1-201ENST00000507713 644 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 RNA5SP143-201ENST00000516936 115 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN9O95484 NDUFA5P2-201ENST00000519723 344 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 SUMO2P20-201ENST00000520803 283 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.74□□□□□ -1.81
CLDN9O95484 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN9O95484 AC040174.2-201ENST00000602701 465 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 AL591034.3-201ENST00000605511 685 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms