Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC018552.3-201ENST00000567416 561 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 AC034105.4-201ENST00000568304 277 ntBASIC3.98□□□□□ -1.77
CTDNEP1O95476 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDNEP1O95476 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTDNEP1O95476 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTDNEP1O95476 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTDNEP1O95476 AL359837.1-201ENST00000381357 287 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 AL603766.1-201ENST00000407763 664 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 MTND4LP13-201ENST00000425022 298 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 AC091286.1-201ENST00000431233 461 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 BX679664.1-201ENST00000434429 253 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 RPL21P23-201ENST00000446654 460 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 OR7L1P-201ENST00000456181 380 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 TRBV8-2-201ENST00000475637 270 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 RN7SKP60-201ENST00000516985 239 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 NPM1P52-201ENST00000518264 846 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.97□□□□□ -1.77
CTDNEP1O95476 AL592295.2-201ENST00000612578 206 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 AL356863.1-201ENST00000623378 1080 ntBASIC3.97□□□□□ -1.77
CTDNEP1O95476 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CTDNEP1O95476 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.77
CTDNEP1O95476 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
CTDNEP1O95476 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTDNEP1O95476 AL356489.2-201ENST00000566968 3528 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 RANP4-201ENST00000413361 655 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC022022.1-201ENST00000430304 178 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 GOT2P5-201ENST00000433995 546 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC073063.1-201ENST00000434352 607 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 HSPD1P21-201ENST00000436541 245 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 RPL21P133-201ENST00000443666 476 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 CLIC4P1-201ENST00000453177 535 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC020593.1-201ENST00000507399 299 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 SNORD116-30-201ENST00000516468 85 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC023632.4-201ENST00000517783 191 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 MTCO1P49-201ENST00000523429 802 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 OR5B10P-201ENST00000532869 642 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC007458.1-201ENST00000542812 373 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC025946.2-201ENST00000603398 234 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 AL392088.2-201ENST00000637607 285 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTDNEP1O95476 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CTDNEP1O95476 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTDNEP1O95476 PNPT1P2-201ENST00000456768 2050 ntBASIC3.96□□□□□ -1.78
CTDNEP1O95476 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTDNEP1O95476 OR11H5P-202ENST00000641612 1325 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 CYP1D1P-201ENST00000416662 1433 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AL133412.1-201ENST00000380194 2992 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 RN7SKP111-201ENST00000410349 271 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 DPY19L1P2-201ENST00000426647 915 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 RPL23AP82-202ENST00000427528 469 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 MTND2P2-201ENST00000434633 945 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC239809.1-201ENST00000450470 217 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 RPL26P28-201ENST00000451325 435 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC097262.1-201ENST00000452559 548 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 CENPBD1P1-201ENST00000464061 469 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC092851.1-201ENST00000535964 478 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC008507.1-201ENST00000587506 734 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC008121.2-201ENST00000614647 523 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AL161637.1-201ENST00000622380 412 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC243312.2-201ENST00000623340 601 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms