Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RPL21P12-201ENST00000559810 515 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AC018552.3-201ENST00000567416 561 ntBASIC7.22□□□□□ -1.25
RNF40O75150 MIR378C-201ENST00000578683 81 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.22□□□□□ -1.25
RNF40O75150 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.22□□□□□ -1.25
RNF40O75150 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF40O75150 AL627230.1-201ENST00000613077 211 ntBASIC7.22□□□□□ -1.25
RNF40O75150 AL445647.2-201ENST00000615170 130 ntBASIC7.22□□□□□ -1.25
RNF40O75150 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 AC139426.3-201ENST00000605648 2059 ntBASIC7.22□□□□□ -1.25
RNF40O75150 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
RNF40O75150 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RNF40O75150 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RNF40O75150 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF40O75150 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF40O75150 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF40O75150 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
RNF40O75150 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
RNF40O75150 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.25
RNF40O75150 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF40O75150 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.21□□□□□ -1.25
RNF40O75150 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.21□□□□□ -1.25
RNF40O75150 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RNF40O75150 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.21□□□□□ -1.25
RNF40O75150 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.21□□□□□ -1.25
RNF40O75150 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RNF40O75150 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RNF40O75150 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RNF40O75150 AL590290.1-201ENST00000405336 380 ntBASIC7.21□□□□□ -1.26
RNF40O75150 MIR1252-201ENST00000408861 65 ntBASIC7.21□□□□□ -1.26
RNF40O75150 POLHP1-201ENST00000411806 470 ntBASIC7.21□□□□□ -1.26
RNF40O75150 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RNF40O75150 AC096632.1-201ENST00000427395 310 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF40O75150 RPS24P8-201ENST00000431490 402 ntBASIC7.21□□□□□ -1.26
RNF40O75150 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF40O75150 AC099670.1-201ENST00000455141 783 ntBASIC7.21□□□□□ -1.26
RNF40O75150 RPL39P38-201ENST00000467018 153 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC090686.1-201ENST00000481577 749 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF40O75150 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF40O75150 RNU6-202P-201ENST00000515998 96 ntBASIC7.21□□□□□ -1.26
RNF40O75150 RNU7-51P-201ENST00000516560 62 ntBASIC7.21□□□□□ -1.26
RNF40O75150 RNA5SP503-201ENST00000517047 117 ntBASIC7.21□□□□□ -1.26
RNF40O75150 SNORA81.3-201ENST00000517283 198 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC116917.1-201ENST00000520558 305 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.21□□□□□ -1.26
RNF40O75150 AP003497.1-201ENST00000528472 562 ntBASIC7.21□□□□□ -1.26
RNF40O75150 OR5D17P-201ENST00000531492 978 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC135001.1-201ENST00000544546 283 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.21□□□□□ -1.26
RNF40O75150 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF40O75150 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF40O75150 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.21□□□□□ -1.26
RNF40O75150 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF40O75150 AC092747.3-201ENST00000603769 301 ntBASIC7.21□□□□□ -1.26
RNF40O75150 RPS4XP21-201ENST00000603814 750 ntBASIC7.21□□□□□ -1.26
RNF40O75150 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.21□□□□□ -1.26
RNF40O75150 MRPL57P3-201ENST00000619218 176 ntBASIC7.21□□□□□ -1.26
RNF40O75150 AL162377.2-201ENST00000624532 337 ntBASIC7.21□□□□□ -1.26
RNF40O75150 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.21□□□□□ -1.26
RNF40O75150 AC025809.2-201ENST00000625085 1802 ntBASIC7.21□□□□□ -1.26
RNF40O75150 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RNF40O75150 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF40O75150 IMMTP1-201ENST00000435590 2219 ntBASIC7.21□□□□□ -1.26
RNF40O75150 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
RNF40O75150 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RNF40O75150 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RNF40O75150 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF40O75150 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
RNF40O75150 AP002833.3-201ENST00000625075 2265 ntBASIC7.2□□□□□ -1.26
RNF40O75150 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF40O75150 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF40O75150 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RNF40O75150 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RNF40O75150 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF40O75150 Y_RNA.222-201ENST00000364264 102 ntBASIC7.2□□□□□ -1.26
RNF40O75150 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.2□□□□□ -1.26
RNF40O75150 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
RNF40O75150 RN7SKP222-201ENST00000410651 315 ntBASIC7.2□□□□□ -1.26
RNF40O75150 SPATA20P1-201ENST00000423089 438 ntBASIC7.2□□□□□ -1.26
RNF40O75150 AC073069.1-201ENST00000428657 441 ntBASIC7.2□□□□□ -1.26
RNF40O75150 AC007365.2-201ENST00000428806 458 ntBASIC7.2□□□□□ -1.26
RNF40O75150 SNAP23P1-201ENST00000433229 246 ntBASIC7.2□□□□□ -1.26
RNF40O75150 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF40O75150 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF40O75150 AC073910.1-201ENST00000445047 438 ntBASIC7.2□□□□□ -1.26
RNF40O75150 AC007967.1-201ENST00000455422 1159 ntBASIC7.2□□□□□ -1.26
RNF40O75150 SNORA81.1-201ENST00000458922 177 ntBASIC7.2□□□□□ -1.26
RNF40O75150 AC004801.2-202ENST00000463559 283 ntBASIC7.2□□□□□ -1.26
RNF40O75150 RN7SL393P-201ENST00000463588 296 ntBASIC7.2□□□□□ -1.26
RNF40O75150 RN7SL168P-201ENST00000463821 279 ntBASIC7.2□□□□□ -1.26
RNF40O75150 MRE11P1-201ENST00000464884 2127 ntBASIC7.2□□□□□ -1.26
RNF40O75150 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms