Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HCN1O60741 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.78□□□□□ -1.8
HCN1O60741 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.78□□□□□ -1.8
HCN1O60741 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HCN1O60741 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.77□□□□□ -1.81
HCN1O60741 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 RNA5SP130-201ENST00000364431 114 ntBASIC3.77□□□□□ -1.81
HCN1O60741 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 RNU6-98P-201ENST00000384173 107 ntBASIC3.77□□□□□ -1.81
HCN1O60741 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
HCN1O60741 RNU6-1005P-201ENST00000384519 107 ntBASIC3.77□□□□□ -1.81
HCN1O60741 HMGB1P13-201ENST00000406019 642 ntBASIC3.77□□□□□ -1.81
HCN1O60741 PGBD4P8-201ENST00000412993 562 ntBASIC3.77□□□□□ -1.81
HCN1O60741 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN1O60741 MTND2P15-201ENST00000418575 892 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AL117339.2-201ENST00000430475 180 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC011742.1-201ENST00000431448 434 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN1O60741 ATP5HP2-201ENST00000433885 485 ntBASIC3.77□□□□□ -1.81
HCN1O60741 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN1O60741 AC097499.1-201ENST00000444277 208 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN1O60741 AC020898.1-201ENST00000474167 787 ntBASIC3.77□□□□□ -1.81
HCN1O60741 NPM1P17-201ENST00000479221 602 ntBASIC3.77□□□□□ -1.81
HCN1O60741 RPL23AP73-201ENST00000492507 471 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC010285.3-201ENST00000511668 676 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.77□□□□□ -1.81
HCN1O60741 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN1O60741 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN1O60741 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN1O60741 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.77□□□□□ -1.81
HCN1O60741 ZNF92P2-201ENST00000600543 1059 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC104662.1-201ENST00000604448 511 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AC011374.2-201ENST00000607135 526 ntBASIC3.77□□□□□ -1.81
HCN1O60741 AL356094.1-201ENST00000624663 1212 ntBASIC3.77□□□□□ -1.81
HCN1O60741 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.77□□□□□ -1.81
HCN1O60741 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HCN1O60741 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN1O60741 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 AC024341.1-201ENST00000526444 1552 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
HCN1O60741 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN1O60741 RNA5SP167-201ENST00000365461 116 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 AC004022.2-201ENST00000413824 193 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 AC019070.1-201ENST00000415008 1024 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AC023128.2-201ENST00000420880 1223 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AL365396.1-201ENST00000430854 671 ntBASIC3.76□□□□□ -1.81
HCN1O60741 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 KCTD10P1-201ENST00000434203 625 ntBASIC3.76□□□□□ -1.81
HCN1O60741 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 RPL21P89-201ENST00000444021 467 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 RPL38P1-201ENST00000460914 211 ntBASIC3.76□□□□□ -1.81
HCN1O60741 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 AP000873.1-201ENST00000463987 400 ntBASIC3.76□□□□□ -1.81
HCN1O60741 RPL7P1-201ENST00000468161 747 ntBASIC3.76□□□□□ -1.81
HCN1O60741 RPL7P9-201ENST00000468715 747 ntBASIC3.76□□□□□ -1.81
HCN1O60741 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.76□□□□□ -1.81
HCN1O60741 SNORA76.2-201ENST00000517095 137 ntBASIC3.76□□□□□ -1.81
HCN1O60741 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HCN1O60741 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.76□□□□□ -1.81
HCN1O60741 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 MIR4286-201ENST00000580651 93 ntBASIC3.76□□□□□ -1.81
HCN1O60741 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.76□□□□□ -1.81
HCN1O60741 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN1O60741 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.76□□□□□ -1.81
HCN1O60741 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HCN1O60741 MTND4P10-201ENST00000446199 1363 ntBASIC3.76□□□□□ -1.81
HCN1O60741 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCN1O60741 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HCN1O60741 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCN1O60741 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN1O60741 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HCN1O60741 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCN1O60741 EXOC5P1-201ENST00000510543 1969 ntBASIC3.75□□□□□ -1.81
HCN1O60741 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCN1O60741 OR11H4-201ENST00000315409 1082 ntBASIC3.75□□□□□ -1.81
HCN1O60741 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HCN1O60741 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
HCN1O60741 SNORA60-201ENST00000362396 134 ntBASIC3.75□□□□□ -1.81
HCN1O60741 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms