Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LINC01355-201ENST00000566551 5444 ntBASIC4.67□□□□□ -1.66
MSI1O43347 AL513185.3-201ENST00000433335 1300 ntBASIC4.67□□□□□ -1.66
MSI1O43347 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.67□□□□□ -1.66
MSI1O43347 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.66□□□□□ -1.66
MSI1O43347 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 RNA5SP151-201ENST00000365632 117 ntBASIC4.66□□□□□ -1.66
MSI1O43347 SNORD116-1-201ENST00000384335 95 ntBASIC4.66□□□□□ -1.66
MSI1O43347 SDHCP2-201ENST00000398565 501 ntBASIC4.66□□□□□ -1.66
MSI1O43347 MIR1302-8-201ENST00000408342 128 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC006960.1-201ENST00000419980 153 ntBASIC4.66□□□□□ -1.66
MSI1O43347 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.66□□□□□ -1.66
MSI1O43347 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.66□□□□□ -1.66
MSI1O43347 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.66□□□□□ -1.66
MSI1O43347 DYNLL1P7-201ENST00000429273 258 ntBASIC4.66□□□□□ -1.66
MSI1O43347 MTCO1P54-201ENST00000430139 712 ntBASIC4.66□□□□□ -1.66
MSI1O43347 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.66□□□□□ -1.66
MSI1O43347 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.66□□□□□ -1.66
MSI1O43347 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC091390.1-201ENST00000433904 331 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC092473.1-201ENST00000441098 221 ntBASIC4.66□□□□□ -1.66
MSI1O43347 MTND5P2-201ENST00000442927 1142 ntBASIC4.66□□□□□ -1.66
MSI1O43347 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.66□□□□□ -1.66
MSI1O43347 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.66□□□□□ -1.66
MSI1O43347 AC104306.1-201ENST00000449702 371 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC012671.1-201ENST00000451912 203 ntBASIC4.66□□□□□ -1.66
MSI1O43347 RPL21P134-201ENST00000453468 483 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.66□□□□□ -1.66
MSI1O43347 AL133477.1-201ENST00000457472 514 ntBASIC4.66□□□□□ -1.66
MSI1O43347 RN7SL481P-201ENST00000477764 299 ntBASIC4.66□□□□□ -1.66
MSI1O43347 RPS27P23-201ENST00000487608 251 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC005912.1-201ENST00000495392 255 ntBASIC4.66□□□□□ -1.66
MSI1O43347 DYNLL1P6-201ENST00000503440 264 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.66□□□□□ -1.66
MSI1O43347 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.66□□□□□ -1.66
MSI1O43347 AC021146.8-201ENST00000507455 733 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.66□□□□□ -1.66
MSI1O43347 AC116353.3-201ENST00000511215 249 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC009643.1-201ENST00000532030 391 ntBASIC4.66□□□□□ -1.66
MSI1O43347 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.66□□□□□ -1.66
MSI1O43347 AC090888.1-201ENST00000561335 1141 ntBASIC4.66□□□□□ -1.66
MSI1O43347 BPTFP1-201ENST00000579209 492 ntBASIC4.66□□□□□ -1.66
MSI1O43347 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.66□□□□□ -1.66
MSI1O43347 NTAN1P1-201ENST00000603150 646 ntBASIC4.66□□□□□ -1.66
MSI1O43347 VIS1.1-201ENST00000610517 203 ntBASIC4.66□□□□□ -1.66
MSI1O43347 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 AL603755.1-201ENST00000619504 163 ntBASIC4.66□□□□□ -1.66
MSI1O43347 MIR6758-201ENST00000620653 63 ntBASIC4.66□□□□□ -1.66
MSI1O43347 MIR4278-201ENST00000636094 69 ntBASIC4.66□□□□□ -1.66
MSI1O43347 AC007671.2-201ENST00000637344 619 ntBASIC4.66□□□□□ -1.66
MSI1O43347 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 AP000776.1-201ENST00000530032 1663 ntBASIC4.66□□□□□ -1.66
MSI1O43347 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.66□□□□□ -1.66
MSI1O43347 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
MSI1O43347 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSI1O43347 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.65□□□□□ -1.66
MSI1O43347 NXPH1-205ENST00000602349 1953 ntBASIC4.65□□□□□ -1.66
MSI1O43347 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
MSI1O43347 AL592182.3-201ENST00000642132 3304 ntBASIC4.65□□□□□ -1.66
MSI1O43347 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.66
MSI1O43347 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
MSI1O43347 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.66
MSI1O43347 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.65□□□□□ -1.66
MSI1O43347 AC008033.1-201ENST00000216407 1162 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RNU1-63P-201ENST00000383902 164 ntBASIC4.65□□□□□ -1.67
MSI1O43347 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MSI1O43347 RNU6-757P-201ENST00000410334 100 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RNA5SP80-201ENST00000410475 111 ntBASIC4.65□□□□□ -1.67
MSI1O43347 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.65□□□□□ -1.67
MSI1O43347 NRBF2P2-201ENST00000413087 861 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RPL21P108-201ENST00000413857 481 ntBASIC4.65□□□□□ -1.67
MSI1O43347 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.65□□□□□ -1.67
MSI1O43347 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.65□□□□□ -1.67
MSI1O43347 AL356387.2-201ENST00000422272 243 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RPL12P34-201ENST00000424532 479 ntBASIC4.65□□□□□ -1.67
MSI1O43347 AC073069.1-201ENST00000428657 441 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RPL21P91-201ENST00000429231 479 ntBASIC4.65□□□□□ -1.67
MSI1O43347 VN1R108P-201ENST00000431580 830 ntBASIC4.65□□□□□ -1.67
MSI1O43347 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.65□□□□□ -1.67
MSI1O43347 AL031663.1-201ENST00000437445 219 ntBASIC4.65□□□□□ -1.67
MSI1O43347 CBX1P1-201ENST00000440184 427 ntBASIC4.65□□□□□ -1.67
MSI1O43347 RPS26P2-201ENST00000440331 348 ntBASIC4.65□□□□□ -1.67
MSI1O43347 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.65□□□□□ -1.67
MSI1O43347 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MSI1O43347 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.65□□□□□ -1.67
MSI1O43347 RPL23AP71-201ENST00000470966 469 ntBASIC4.65□□□□□ -1.67
MSI1O43347 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.65□□□□□ -1.67
MSI1O43347 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MSI1O43347 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.65□□□□□ -1.67
MSI1O43347 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
MSI1O43347 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.65□□□□□ -1.67
MSI1O43347 RNA5SP446-201ENST00000515955 82 ntBASIC4.65□□□□□ -1.67
MSI1O43347 AP000619.3-201ENST00000535634 1127 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms