Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC110792.2-201ENST00000510278 224 ntBASIC3.8□□□□□ -1.8
LSM1O15116 HMGB1P46-201ENST00000520062 610 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.8□□□□□ -1.8
LSM1O15116 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.8□□□□□ -1.8
LSM1O15116 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM1O15116 AP000919.1-202ENST00000581139 1264 ntBASIC3.8□□□□□ -1.8
LSM1O15116 RN7SL600P-201ENST00000581811 299 ntBASIC3.8□□□□□ -1.8
LSM1O15116 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM1O15116 IPO5P1-202ENST00000600039 287 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LSM1O15116 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM1O15116 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM1O15116 AC119744.1-201ENST00000454746 1715 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.8□□□□□ -1.8
LSM1O15116 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
LSM1O15116 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM1O15116 AC005261.4-201ENST00000600047 1385 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSM1O15116 MIR153-1-201ENST00000384914 90 ntBASIC3.79□□□□□ -1.8
LSM1O15116 HNRNPDP2-201ENST00000406475 478 ntBASIC3.79□□□□□ -1.8
LSM1O15116 RNU2-65P-201ENST00000410162 185 ntBASIC3.79□□□□□ -1.8
LSM1O15116 RNU2-21P-201ENST00000410368 188 ntBASIC3.79□□□□□ -1.8
LSM1O15116 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.79□□□□□ -1.8
LSM1O15116 RPL26P29-201ENST00000415623 438 ntBASIC3.79□□□□□ -1.8
LSM1O15116 MTCO3P4-201ENST00000419236 787 ntBASIC3.79□□□□□ -1.8
LSM1O15116 NEK4P1-201ENST00000433383 879 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM1O15116 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 ARL5AP2-201ENST00000444698 533 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM1O15116 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 RN7SL860P-201ENST00000473738 223 ntBASIC3.79□□□□□ -1.8
LSM1O15116 RN7SL459P-201ENST00000481078 302 ntBASIC3.79□□□□□ -1.8
LSM1O15116 RPL23AP44-201ENST00000482216 473 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC105137.1-201ENST00000484355 562 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AL132838.2-201ENST00000492041 314 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM1O15116 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM1O15116 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 CYCSP29-201ENST00000533731 318 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM1O15116 CR383656.6-201ENST00000550518 394 ntBASIC3.79□□□□□ -1.8
LSM1O15116 ZNF192P1-203ENST00000565888 810 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC006270.2-201ENST00000578523 652 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 CBX3P2-202ENST00000583365 535 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.79□□□□□ -1.8
LSM1O15116 MIR3138-201ENST00000585238 82 ntBASIC3.79□□□□□ -1.8
LSM1O15116 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM1O15116 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.79□□□□□ -1.8
LSM1O15116 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM1O15116 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.79□□□□□ -1.8
LSM1O15116 AC008745.1-201ENST00000604064 271 ntBASIC3.79□□□□□ -1.8
LSM1O15116 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
LSM1O15116 AC011816.2-201ENST00000607089 556 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC011374.2-201ENST00000607135 526 ntBASIC3.79□□□□□ -1.8
LSM1O15116 AC010435.1-201ENST00000623353 1177 ntBASIC3.79□□□□□ -1.8
LSM1O15116 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSM1O15116 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.79□□□□□ -1.8
LSM1O15116 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 GABPAP-201ENST00000419271 1356 ntBASIC3.78□□□□□ -1.8
LSM1O15116 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 LINC00561-201ENST00000565815 2738 ntBASIC3.78□□□□□ -1.8
LSM1O15116 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 METTL21EP-201ENST00000298105 713 ntBASIC3.78□□□□□ -1.8
LSM1O15116 RNA5SP391-201ENST00000363456 119 ntBASIC3.78□□□□□ -1.8
LSM1O15116 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.8
LSM1O15116 ENSAP1-201ENST00000392855 326 ntBASIC3.78□□□□□ -1.8
LSM1O15116 RNU2-37P-201ENST00000410695 177 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AC016397.1-201ENST00000412463 242 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
LSM1O15116 AC108032.1-201ENST00000416706 207 ntBASIC3.78□□□□□ -1.8
LSM1O15116 LINC01347-201ENST00000417964 355 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM1O15116 AC009480.2-201ENST00000422916 432 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AL356276.2-201ENST00000435919 558 ntBASIC3.78□□□□□ -1.8
LSM1O15116 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 XKRY2-201ENST00000442362 1093 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 MTCO1P31-201ENST00000506355 492 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
LSM1O15116 MTCO1P30-201ENST00000515244 580 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AC087369.1-201ENST00000520775 996 ntBASIC3.78□□□□□ -1.8
LSM1O15116 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.78□□□□□ -1.8
LSM1O15116 AP003730.1-201ENST00000524605 285 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AC091516.1-201ENST00000549191 703 ntBASIC3.78□□□□□ -1.8
LSM1O15116 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LSM1O15116 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms