Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUX2O14529 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CUX2O14529 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC6.08□□□□□ -1.44
CUX2O14529 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.08□□□□□ -1.44
CUX2O14529 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CUX2O14529 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CUX2O14529 MIR504-201ENST00000385065 83 ntBASIC6.08□□□□□ -1.44
CUX2O14529 AC017079.2-201ENST00000416102 485 ntBASIC6.08□□□□□ -1.44
CUX2O14529 OR2X1P-201ENST00000421144 687 ntBASIC6.08□□□□□ -1.44
CUX2O14529 OR6K4P-201ENST00000423179 955 ntBASIC6.08□□□□□ -1.44
CUX2O14529 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.08□□□□□ -1.44
CUX2O14529 AC073508.1-201ENST00000428866 656 ntBASIC6.08□□□□□ -1.44
CUX2O14529 RPL21P112-201ENST00000434403 463 ntBASIC6.08□□□□□ -1.44
CUX2O14529 AL356535.1-201ENST00000440335 398 ntBASIC6.08□□□□□ -1.44
CUX2O14529 SLC31A1P1-201ENST00000451221 567 ntBASIC6.08□□□□□ -1.44
CUX2O14529 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.08□□□□□ -1.44
CUX2O14529 ATP5A1P2-202ENST00000616464 443 ntBASIC6.08□□□□□ -1.44
CUX2O14529 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CUX2O14529 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CUX2O14529 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CUX2O14529 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CUX2O14529 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CUX2O14529 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.07□□□□□ -1.44
CUX2O14529 NPM1P38-201ENST00000403835 865 ntBASIC6.07□□□□□ -1.44
CUX2O14529 KRTAP19-11P-201ENST00000439851 104 ntBASIC6.07□□□□□ -1.44
CUX2O14529 RPS20P32-201ENST00000456044 356 ntBASIC6.07□□□□□ -1.44
CUX2O14529 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.07□□□□□ -1.44
CUX2O14529 FAM172BP-201ENST00000487497 1089 ntBASIC6.07□□□□□ -1.44
CUX2O14529 AC017037.2-201ENST00000513850 890 ntBASIC6.07□□□□□ -1.44
CUX2O14529 AC091826.1-201ENST00000514065 313 ntBASIC6.07□□□□□ -1.44
CUX2O14529 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.07□□□□□ -1.44
CUX2O14529 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.07□□□□□ -1.44
CUX2O14529 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.07□□□□□ -1.44
CUX2O14529 AC008638.3-201ENST00000603341 463 ntBASIC6.07□□□□□ -1.44
CUX2O14529 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC6.07□□□□□ -1.44
CUX2O14529 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.07□□□□□ -1.44
CUX2O14529 UBE3AP2-201ENST00000429033 2259 ntBASIC6.07□□□□□ -1.44
CUX2O14529 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.06□□□□□ -1.44
CUX2O14529 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUX2O14529 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.06□□□□□ -1.44
CUX2O14529 Z83843.1-201ENST00000604070 3685 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AC011266.1-201ENST00000624119 3569 ntBASIC6.06□□□□□ -1.44
CUX2O14529 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUX2O14529 TOMM20P4-201ENST00000427861 435 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AC073069.1-201ENST00000428657 441 ntBASIC6.06□□□□□ -1.44
CUX2O14529 KCTD9P3-201ENST00000434597 1169 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.06□□□□□ -1.44
CUX2O14529 RPL7P36-201ENST00000444633 681 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AP002884.2-201ENST00000471647 395 ntBASIC6.06□□□□□ -1.44
CUX2O14529 S100A11P1-201ENST00000477525 312 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AC025445.1-201ENST00000502728 300 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.06□□□□□ -1.44
CUX2O14529 AL163642.2-201ENST00000604722 1019 ntBASIC6.06□□□□□ -1.44
CUX2O14529 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.06□□□□□ -1.44
CUX2O14529 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.06□□□□□ -1.44
CUX2O14529 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CUX2O14529 AC132825.8-201ENST00000640783 297 ntBASIC6.06□□□□□ -1.44
CUX2O14529 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUX2O14529 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CUX2O14529 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CUX2O14529 AL022322.2-201ENST00000624072 20397 ntBASIC6.05□□□□□ -1.44
CUX2O14529 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CUX2O14529 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUX2O14529 Y_RNA.238-201ENST00000364441 102 ntBASIC6.05□□□□□ -1.44
CUX2O14529 AL353678.1-201ENST00000422735 741 ntBASIC6.05□□□□□ -1.44
CUX2O14529 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.05□□□□□ -1.44
CUX2O14529 KATNBL1P2-201ENST00000433311 835 ntBASIC6.05□□□□□ -1.44
CUX2O14529 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.05□□□□□ -1.44
CUX2O14529 HMGB1P5-202ENST00000451497 985 ntBASIC6.05□□□□□ -1.44
CUX2O14529 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.05□□□□□ -1.44
CUX2O14529 SETP1-201ENST00000556014 845 ntBASIC6.05□□□□□ -1.44
CUX2O14529 AC139713.2-210ENST00000641741 992 ntBASIC6.05□□□□□ -1.44
CUX2O14529 AL022311.1-201ENST00000623726 19416 ntBASIC6.05□□□□□ -1.44
CUX2O14529 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CUX2O14529 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CUX2O14529 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.04□□□□□ -1.44
CUX2O14529 AC092447.2-201ENST00000435487 669 ntBASIC6.04□□□□□ -1.44
CUX2O14529 U3.44-201ENST00000458938 192 ntBASIC6.04□□□□□ -1.44
CUX2O14529 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.04□□□□□ -1.44
CUX2O14529 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 DDX6P1-205ENST00000441966 1436 ntBASIC6.04□□□□□ -1.44
CUX2O14529 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 AC093535.2-201ENST00000624769 2326 ntBASIC6.04□□□□□ -1.44
CUX2O14529 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CUX2O14529 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUX2O14529 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.03□□□□□ -1.44
CUX2O14529 AC021733.2-201ENST00000518830 497 ntBASIC6.03□□□□□ -1.44
CUX2O14529 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUX2O14529 NRBF2P5-201ENST00000603087 788 ntBASIC6.03□□□□□ -1.44
CUX2O14529 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUX2O14529 AC015813.4-201ENST00000610469 179 ntBASIC6.03□□□□□ -1.44
CUX2O14529 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUX2O14529 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC6.03□□□□□ -1.44
CUX2O14529 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.03□□□□□ -1.44
CUX2O14529 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 278.7 ms