Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.97□□□□□ -1.93
SDCBPO00560 AL357552.1-201ENST00000445254 415 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 RPL12P26-201ENST00000452430 487 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 USP9YP32-201ENST00000452432 430 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 HMGB3P21-201ENST00000452483 547 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.97□□□□□ -1.93
SDCBPO00560 SNRPGP5-201ENST00000456003 220 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC010468.1-201ENST00000461022 817 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 RPL6P9-201ENST00000466502 859 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC006511.1-201ENST00000470614 315 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC087312.1-201ENST00000471411 480 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 RN7SL442P-201ENST00000473804 320 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 MTND4LP31-201ENST00000514859 294 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 MIR2276-201ENST00000516886 89 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 PDCL2P2-201ENST00000533651 189 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.97□□□□□ -1.93
SDCBPO00560 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.97□□□□□ -1.93
SDCBPO00560 AC084757.1-201ENST00000559987 490 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC106785.3-201ENST00000564064 847 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 MIR3160-1-201ENST00000577972 85 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.97□□□□□ -1.93
SDCBPO00560 AL451086.1-201ENST00000605596 223 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 RNU1-30P-201ENST00000606575 163 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AL391497.1-201ENST00000608671 547 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 MIR6810-201ENST00000622701 70 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.97□□□□□ -1.93
SDCBPO00560 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.97□□□□□ -1.93
SDCBPO00560 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SDCBPO00560 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
SDCBPO00560 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.96□□□□□ -1.93
SDCBPO00560 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SDCBPO00560 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 AL513302.2-201ENST00000562313 1842 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.96□□□□□ -1.94
SDCBPO00560 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 AL445437.1-201ENST00000623157 3087 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SDCBPO00560 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SDCBPO00560 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.96□□□□□ -1.94
SDCBPO00560 CASKP1-201ENST00000412870 582 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.96□□□□□ -1.94
SDCBPO00560 RPS12P23-201ENST00000419579 400 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.96□□□□□ -1.94
SDCBPO00560 AL513174.1-201ENST00000423182 629 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SDCBPO00560 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC245517.2-201ENST00000442890 346 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 RPL7P31-201ENST00000450192 724 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC007688.1-201ENST00000475592 759 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 FTH1P24-201ENST00000503502 462 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AP001960.1-201ENST00000506494 658 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 FABP5P12-201ENST00000515543 389 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 RN7SKP21-201ENST00000516503 220 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 SNORA70.19-201ENST00000516717 90 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 OR4C2P-201ENST00000530855 1064 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.96□□□□□ -1.94
SDCBPO00560 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.96□□□□□ -1.94
SDCBPO00560 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.96□□□□□ -1.94
SDCBPO00560 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SDCBPO00560 AL049634.3-201ENST00000604968 457 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.96□□□□□ -1.94
SDCBPO00560 AC024941.1-201ENST00000612250 334 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AC069209.1-201ENST00000619282 651 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AL713922.2-201ENST00000619384 716 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 AP003355.3-201ENST00000623465 114 ntBASIC2.96□□□□□ -1.94
SDCBPO00560 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SDCBPO00560 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.96□□□□□ -1.94
SDCBPO00560 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.96□□□□□ -1.94
SDCBPO00560 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.95□□□□□ -1.94
SDCBPO00560 AC110792.3-201ENST00000595906 1614 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 RPS15AP6-201ENST00000420703 385 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDCBPO00560 GLRXP1-201ENST00000423261 334 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 FAR1P1-201ENST00000427163 934 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC092013.1-201ENST00000438795 332 ntBASIC2.95□□□□□ -1.94
SDCBPO00560 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SDCBPO00560 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.95□□□□□ -1.94
SDCBPO00560 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms