Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC099522.1-202ENST00000514718 367 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 RNU6-488P-201ENST00000515918 99 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 RNU6-202P-201ENST00000515998 96 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 RNU6-416P-201ENST00000516265 103 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 GNRHR2P1-201ENST00000555315 631 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC28A1O00337 CYP2C60P-201ENST00000566088 139 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC090079.2-201ENST00000575289 768 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AC133794.1-201ENST00000602731 914 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC009948.4-201ENST00000604692 675 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL451044.1-201ENST00000604867 238 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 OR6R2P-201ENST00000609216 300 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC28A1O00337 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC28A1O00337 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC28A1O00337 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC28A1O00337 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC28A1O00337 AL136520.1-201ENST00000600311 1322 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC116667.1-201ENST00000604855 2072 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC018555.1-201ENST00000567548 1980 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC28A1O00337 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC28A1O00337 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 SNORD35B-201ENST00000363660 87 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 RNU1-132P-201ENST00000364300 164 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SLC28A1O00337 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 MIR124-3-201ENST00000384866 87 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 MIR153-1-201ENST00000384914 90 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 DSTNP4-201ENST00000399472 474 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AL603766.1-201ENST00000407763 664 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC28A1O00337 OR4F13P-201ENST00000428478 931 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AC096638.2-201ENST00000434965 711 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC006011.1-201ENST00000442758 349 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC28A1O00337 RPL7P1-201ENST00000468161 747 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 RPL7P9-201ENST00000468715 747 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC28A1O00337 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC28A1O00337 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC28A1O00337 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 SOD1P3-201ENST00000518682 454 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 HIGD1AP6-201ENST00000521833 279 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC28A1O00337 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC28A1O00337 AC068339.2-201ENST00000534395 618 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC28A1O00337 NIFKP8-201ENST00000560500 874 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 AL161729.3-201ENST00000603533 673 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 LLPHP1-201ENST00000603571 367 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 AP002371.2-201ENST00000624450 503 ntBASIC3.94□□□□□ -1.78
SLC28A1O00337 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC28A1O00337 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SLC28A1O00337 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC28A1O00337 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC28A1O00337 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC28A1O00337 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 MIR192-201ENST00000384915 110 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC136624.1-201ENST00000400791 413 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 RPS4XP9-201ENST00000405151 780 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 MIR1251-201ENST00000408552 70 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 ELOCP19-201ENST00000411919 318 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC28A1O00337 RPS27AP7-201ENST00000422792 455 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 COX6B1P7-201ENST00000430845 235 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AL358472.1-201ENST00000431295 329 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC087650.1-201ENST00000431445 468 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 RPL7P28-201ENST00000437739 740 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms