Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ETF1P3-201ENST00000430422 1160 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 UBE2V1P6-201ENST00000430840 422 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 MTCYBP31-201ENST00000438855 1122 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 RPL21P126-201ENST00000470049 478 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 CYCSP20-201ENST00000473154 315 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 TRBV8-2-201ENST00000475637 270 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC013356.1-201ENST00000489027 564 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 RPL31P61-201ENST00000496160 376 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 OR5H3P-201ENST00000502817 919 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 RAB9BP1-201ENST00000519581 626 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC093331.1-201ENST00000521474 169 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC092451.2-201ENST00000538746 658 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 CR383656.14-201ENST00000551951 406 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM1O00151 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AL354984.3-201ENST00000604803 325 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC011816.2-201ENST00000607089 556 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC090948.1-201ENST00000607464 549 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC099778.2-201ENST00000610904 211 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC106730.3-201ENST00000624568 641 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM1O00151 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM1O00151 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.92□□□□□ -1.78
PDLIM1O00151 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 AL353743.4-201ENST00000422653 1547 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 CR381670.1-201ENST00000624291 1693 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM1O00151 U3.15-201ENST00000365398 212 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 RNU6-481P-201ENST00000384194 107 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AL445183.3-201ENST00000414168 502 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 RPL31P12-201ENST00000422587 358 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AC002075.2-201ENST00000425207 252 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AC093422.3-201ENST00000428506 305 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 TXNP1-201ENST00000441872 371 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.92□□□□□ -1.78
PDLIM1O00151 EIF2S2P2-201ENST00000447161 982 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC009220.1-201ENST00000451614 275 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM1O00151 Z95152.1-201ENST00000453556 656 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 RAD23BP3-201ENST00000454157 1152 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 DHFRP3-201ENST00000455595 559 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 SETP6-201ENST00000479329 568 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM1O00151 RPL21P47-201ENST00000483696 477 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 HPRT1P2-201ENST00000505250 544 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.92□□□□□ -1.78
PDLIM1O00151 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AL845331.3-202ENST00000562856 261 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM1O00151 AC106734.1-201ENST00000568646 663 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 MRPS35P3-201ENST00000603189 709 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 MTATP6P2-201ENST00000603319 678 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC079587.1-201ENST00000603846 277 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC120053.1-201ENST00000607706 736 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.92□□□□□ -1.78
PDLIM1O00151 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC080188.3-201ENST00000624842 748 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 ATE1-AS1-202ENST00000636460 506 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 U6.107-201ENST00000637108 79 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AL773545.4-201ENST00000637262 310 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AC132825.7-201ENST00000638744 335 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 AL513478.4-201ENST00000641636 310 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 MTCO1P4-201ENST00000520516 1409 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 SAGE2P-201ENST00000420011 2126 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms