Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LIPT1P1-201ENST00000415870 1186 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AC008264.1-201ENST00000447612 367 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 SNORD105B-201ENST00000458770 79 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AC087312.1-201ENST00000471411 480 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AC104619.4-201ENST00000510773 249 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 SNORA70.14-201ENST00000516205 110 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 RNA5SP309-201ENST00000516670 106 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AP001636.2-201ENST00000525517 696 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AC084824.1-201ENST00000550917 1005 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AL109741.3-201ENST00000561748 592 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 MIR4697-201ENST00000582977 78 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AC020914.6-201ENST00000594327 272 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 AL121772.2-201ENST00000614331 297 ntBASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAV27A0A087WT01 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TRAV27A0A087WT01 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
TRAV27A0A087WT01 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 ZNF285B-201ENST00000561698 1767 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AL359837.1-201ENST00000381357 287 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 MTND4LP21-201ENST00000415303 295 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC007064.3-201ENST00000422608 359 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 FAR1P1-201ENST00000427163 934 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC092013.1-201ENST00000438795 332 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC073387.1-201ENST00000453261 709 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 HMGN1P18-201ENST00000457642 277 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 CYCSP20-201ENST00000473154 315 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC087385.1-201ENST00000475062 312 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 TRBV8-2-201ENST00000475637 270 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC021205.2-201ENST00000480069 347 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 ACTR3P3-201ENST00000480448 893 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 NIPA2P2-201ENST00000496376 1083 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 USP9YP5-201ENST00000511770 630 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 MTND4LP31-201ENST00000514859 294 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 MIR4716-201ENST00000579628 84 ntBASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAV27A0A087WT01 AC007496.3-201ENST00000624987 3443 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RNU1-75P-201ENST00000347264 129 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RNA5SP124-201ENST00000362739 110 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RNA5SP479-201ENST00000364858 117 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 CYCSP19-201ENST00000411715 316 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 CRYBB2P1-203ENST00000415709 538 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RPL31P12-201ENST00000422587 358 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 USP9YP7-201ENST00000436723 430 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RRM2P4-201ENST00000441721 562 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 USP9YP32-201ENST00000452432 430 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RPL6P9-201ENST00000466502 859 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 SEPT7P6-201ENST00000469999 1143 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC025518.1-201ENST00000479856 347 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 HMGB1P21-201ENST00000502313 581 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 RN7SKP13-201ENST00000515933 244 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 SMARCE1P4-201ENST00000523647 241 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 MTND2P13-201ENST00000577438 1039 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 AC008507.1-201ENST00000587506 734 ntBASIC3.07□□□□□ -1.92
TRAV27A0A087WT01 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms