Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC009237.3-203ENST00000442128 3551 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 THAP12P4-201ENST00000528321 2266 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 snoU2_19.2-201ENST00000363024 80 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 RN7SKP130-201ENST00000364924 301 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 PDCL3P5-201ENST00000398028 722 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL136372.1-201ENST00000403060 228 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL080315.1-201ENST00000406055 466 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL035461.1-201ENST00000421490 332 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC008753.1-201ENST00000423096 284 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL645568.3-201ENST00000433683 316 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC087385.1-201ENST00000475062 312 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC079944.1-201ENST00000485426 495 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC110792.1-201ENST00000491826 472 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 TECRP2-201ENST00000503270 928 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 IGKV2-36-201ENST00000519999 223 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL359219.2-201ENST00000555184 348 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC005341.1-201ENST00000571086 708 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 COX6CP16-201ENST00000603667 216 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL136139.1-201ENST00000605568 222 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 NAMPTP1-201ENST00000440465 2514 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AL359263.1-201ENST00000441188 2796 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 AC023421.1-201ENST00000590535 1785 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 OR5M2P-202ENST00000641241 4242 ntBASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
VPS9D1Q9Y2B5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 IMMTP1-201ENST00000435590 2219 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC103710.2-202ENST00000641454 2853 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC107980.1-201ENST00000558671 3355 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 SNORA51.6-201ENST00000384151 125 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC090114.1-201ENST00000393266 448 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 BMS1P22-201ENST00000414726 313 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC008280.1-201ENST00000418851 412 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC093655.2-201ENST00000425735 631 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 CALM2P2-201ENST00000428512 440 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 MTND6P5-201ENST00000448266 512 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 CYCSP44-201ENST00000448560 313 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 TPT1P12-201ENST00000448968 492 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 snoU13.8-201ENST00000458890 104 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 RPL34P34-201ENST00000465389 354 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC087477.1-201ENST00000465747 340 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC008620.1-201ENST00000468453 592 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 MYL6P4-201ENST00000477911 453 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 CHCHD2P7-201ENST00000508008 452 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 Y_RNA.713-201ENST00000517013 96 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 COX6CP3-201ENST00000580869 223 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC006023.2-201ENST00000609916 167 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms