Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC010615.1-201ENST00000594254 1764 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC104581.5-201ENST00000624171 7141 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 RNU6-890P-201ENST00000384121 107 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 U3.43-201ENST00000410734 213 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 RSL24D1P6-201ENST00000426934 401 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 RPL7L1P10-201ENST00000427790 463 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC093716.1-201ENST00000435923 377 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 OR1H1P-201ENST00000448731 937 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 RNA5SP454-201ENST00000517231 127 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC012400.1-201ENST00000518452 381 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC036111.2-201ENST00000533247 901 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 GNAI2P1-201ENST00000541815 315 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC121334.2-201ENST00000605387 271 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AP001521.1-201ENST00000609150 300 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AL080312.2-201ENST00000613001 630 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AP005431.1-201ENST00000618479 319 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 AC022034.1-201ENST00000512867 2156 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 TMEM75-201ENST00000624314 2165 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 MTND5P7-201ENST00000413558 1798 ntBASIC7.54□□□□□ -1.2
HPS5Q9UPZ3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC068870.3-201ENST00000625077 2536 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AL731566.1-201ENST00000620490 1937 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SNORA20.1-201ENST00000364790 130 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SNORD50B-201ENST00000364995 70 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 RN7SKP292-201ENST00000365522 317 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SNORA75B-201ENST00000384053 137 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 MIR130B-202ENST00000385018 82 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 RN7SKP281-201ENST00000410472 352 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AL731534.1-201ENST00000434711 269 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 UBE2V1P5-201ENST00000440070 405 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AL645936.1-201ENST00000441979 518 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC058823.1-201ENST00000485315 474 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC073610.1-201ENST00000489971 396 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 TRBVA-201ENST00000498804 316 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AK3P4-201ENST00000504283 583 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SLC25A15P5-201ENST00000508033 253 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 RNA5SP340-201ENST00000517132 107 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 OR4P1P-201ENST00000530808 1136 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC233702.7-202ENST00000582941 211 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AL355297.3-201ENST00000604082 446 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC009831.5-201ENST00000624000 3189 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC027575.3-201ENST00000583058 2747 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 CUBNP3-201ENST00000457461 1784 ntBASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
HPS5Q9UPZ3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.52□□□□□ -1.2
HPS5Q9UPZ3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
HPS5Q9UPZ3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms