Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC243428.1-201ENST00000421099 264 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 RAD23BP1-201ENST00000421404 1227 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 DSTNP5-201ENST00000427921 523 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 USP24P1-201ENST00000433802 779 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 RPS3AP52-201ENST00000435639 297 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC002504.1-201ENST00000438281 691 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AL645937.3-201ENST00000453647 936 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 VN1R17P-201ENST00000472048 1090 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC012181.1-201ENST00000479895 423 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 CR383656.1-201ENST00000484916 377 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 RN7SL466P-201ENST00000497546 295 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 SNX5P1-201ENST00000505757 1041 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 NPM1P52-201ENST00000518264 846 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC087808.1-201ENST00000520501 361 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AP000676.2-201ENST00000529711 301 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC026464.5-201ENST00000562497 722 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AP004372.1-201ENST00000604842 844 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC104010.1-201ENST00000616889 150 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC141273.2-201ENST00000618989 130 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 MIR6719-201ENST00000622428 87 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AL359757.2-201ENST00000624309 274 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 AC012254.3-201ENST00000591183 2117 ntBASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDZRN3Q9UPQ7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 Z83820.1-201ENST00000456978 1499 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC012618.3-205ENST00000637896 1496 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 RNA5SP375-201ENST00000362975 119 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 SNORD65.1-201ENST00000390889 71 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 MTCYBP4-201ENST00000401524 249 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 RNU4-14P-201ENST00000410858 122 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 RPL35AP3-201ENST00000414680 288 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 ISCA1P6-201ENST00000427740 390 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 SUMO2P3-201ENST00000438311 288 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 RNU6-1314P-201ENST00000517139 104 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 RBM22P12-201ENST00000567098 1255 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC125494.2-201ENST00000602431 657 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 SUMO2P14-201ENST00000604488 293 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC104695.2-201ENST00000605056 775 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC141002.1-201ENST00000607025 279 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AP005137.2-201ENST00000609238 400 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC096861.1-201ENST00000616652 240 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AL133216.2-202ENST00000634512 349 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AL031985.3-201ENST00000565390 2449 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 OFD1P17-201ENST00000437639 3018 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PDZRN3Q9UPQ7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AL512646.1-201ENST00000269395 1077 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 METTL21EP-201ENST00000298105 713 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 OR9K1P-201ENST00000326513 941 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 U8.3-201ENST00000363321 132 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 RNU6-770P-201ENST00000363929 105 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AL589994.1-201ENST00000404962 340 ntBASIC7.62□□□□□ -1.19
PDZRN3Q9UPQ7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms