Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 NANOGP2-201ENST00000435391 727 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AL356276.2-201ENST00000435919 558 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 EEF1A1P39-201ENST00000440791 250 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 ARL5AP2-201ENST00000444698 533 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC068135.1-201ENST00000446164 246 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 PTMAP3-201ENST00000447474 330 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC005410.1-202ENST00000460347 485 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 IGKV2D-10-201ENST00000520194 281 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC023813.2-201ENST00000564321 469 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 MTND3P13-201ENST00000574391 343 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 SS18L2P2-201ENST00000583960 235 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 DUXAP3-201ENST00000603616 594 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC015908.5-201ENST00000623289 343 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC004777.1-201ENST00000624317 287 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 MIR492-201ENST00000638676 116 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC027290.2-201ENST00000623210 18662 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 AC111188.2-201ENST00000529697 1387 ntBASIC4.49□□□□□ -1.69
SIX4Q9UIU6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX4Q9UIU6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 GTF2H2B-203ENST00000508065 1432 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC000123.3-201ENST00000624029 4975 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 RNY3P9-201ENST00000384727 106 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 MIR320B1-201ENST00000390209 79 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC136624.1-201ENST00000400791 413 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 MTCO1P56-201ENST00000401674 224 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AL136310.1-201ENST00000404926 654 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AP000357.1-201ENST00000409926 1165 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 RN7SKP222-201ENST00000410651 315 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC105402.1-201ENST00000413336 545 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC004975.1-201ENST00000428733 208 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC084290.1-201ENST00000434995 374 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC092170.1-201ENST00000440211 356 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 GEMIN8P3-201ENST00000445417 720 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AP000563.1-201ENST00000490865 758 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AF186190.1-201ENST00000517470 480 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC008083.2-201ENST00000546707 476 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 BNIP3P24-201ENST00000593398 557 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC020910.2-201ENST00000603635 610 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC133552.5-201ENST00000604266 540 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC025588.2-201ENST00000604851 466 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AC009237.15-201ENST00000610252 501 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 MIR6867-201ENST00000610636 67 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 MIR7154-201ENST00000620673 73 ntBASIC4.48□□□□□ -1.69
SIX4Q9UIU6 MTND4P10-201ENST00000446199 1363 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms