Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC073143.1-201ENST00000436316 395 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC074367.1-201ENST00000438685 1125 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL590399.6-201ENST00000446396 307 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 HMGN2P21-201ENST00000447764 270 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC104306.1-201ENST00000449702 371 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 RPL23AP2-201ENST00000471227 466 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 UQCRHP4-201ENST00000471686 272 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC041039.1-201ENST00000485656 536 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC108475.1-201ENST00000507880 950 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC106806.2-201ENST00000509365 500 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 OR4R3P-201ENST00000525084 838 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC105233.3-201ENST00000531125 744 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 OR1AB1P-201ENST00000585564 761 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL161729.3-201ENST00000603533 673 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC007566.2-201ENST00000603642 413 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL136295.6-201ENST00000610486 658 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 RMST_10.1-201ENST00000616309 154 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC006213.5-201ENST00000619673 288 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 MIR3653-201ENST00000625572 110 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 AC107081.3-201ENST00000612715 2034 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA9Q9UGM1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 SEPT7P7-201ENST00000420492 1301 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 SNORA37-201ENST00000384504 129 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 RNU6-1151P-201ENST00000384684 107 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 RN7SKP182-201ENST00000410772 298 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 RNU6-272P-201ENST00000411028 104 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 EI24P1-201ENST00000416584 867 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 COX6B1P7-201ENST00000430845 235 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 BTF3P10-201ENST00000433415 495 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC004865.1-201ENST00000442276 1003 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 MTND1P33-201ENST00000446251 917 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC109327.1-201ENST00000471666 403 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC015724.1-201ENST00000478577 156 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC091167.1-201ENST00000492017 396 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC106872.2-201ENST00000494303 480 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 HNRNPKP5-201ENST00000515300 253 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AP003717.3-201ENST00000544832 1180 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 MTCYBP28-201ENST00000566728 1132 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC090616.5-202ENST00000582111 297 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC068620.4-201ENST00000636730 1182 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHRNA9Q9UGM1 AC025263.3-201ENST00000622965 1396 ntBASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHRNA9Q9UGM1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms