Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL359893.1-201ENST00000447628 1580 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 OR1L6-202ENST00000373684 1044 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 MIR153-1-201ENST00000384914 90 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 EIF5P1-201ENST00000400019 1231 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 RPL31P45-201ENST00000419532 356 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 PTP4A1P5-201ENST00000420305 455 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 OFD1P18Y-201ENST00000420889 959 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 MTND4P6-201ENST00000438297 472 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 TCEA1P3-201ENST00000443005 880 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL137845.2-201ENST00000444292 988 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 OR6K5P-201ENST00000447050 945 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC026410.2-201ENST00000460281 156 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 PABPC1P3-201ENST00000469174 459 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 NDUFA5P9-201ENST00000472609 340 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 RN7SL319P-201ENST00000480656 221 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC093267.1-201ENST00000489176 961 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC108078.3-201ENST00000502633 489 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC108941.1-201ENST00000502853 530 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC114981.1-201ENST00000503897 678 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC010350.1-201ENST00000504908 231 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC010486.2-201ENST00000505572 483 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 DEFB131D-201ENST00000526803 184 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC008033.2-201ENST00000542626 177 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC079075.1-201ENST00000559543 878 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 LARP7P2-201ENST00000575306 125 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 ISCA1P3-201ENST00000577104 373 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC233702.9-201ENST00000581528 203 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC106791.2-201ENST00000604680 391 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 MEMO1P5-201ENST00000604810 406 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL133507.1-201ENST00000605269 557 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL159169.3-201ENST00000608871 561 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL359757.1-201ENST00000623176 255 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 U6.101-201ENST00000637707 76 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC008758.3-201ENST00000507003 1829 ntBASIC4.66□□□□□ -1.66
LRFN1Q9P244 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN1Q9P244 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN1Q9P244 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN1Q9P244 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.65□□□□□ -1.66
LRFN1Q9P244 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN1Q9P244 IQCB2P-201ENST00000401788 1633 ntBASIC4.65□□□□□ -1.66
LRFN1Q9P244 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN1Q9P244 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
LRFN1Q9P244 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.65□□□□□ -1.66
LRFN1Q9P244 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
LRFN1Q9P244 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN1Q9P244 NMD3P1-201ENST00000439704 1488 ntBASIC4.65□□□□□ -1.66
LRFN1Q9P244 OR5H2-201ENST00000355273 945 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 RN7SKP149-201ENST00000363008 344 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN1Q9P244 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.65□□□□□ -1.67
LRFN1Q9P244 RNU6-730P-201ENST00000383954 104 ntBASIC4.65□□□□□ -1.67
LRFN1Q9P244 RNU6-1200P-201ENST00000384162 107 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms