Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC113194.1-201ENST00000606037 500 ntBASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 AC122133.1-201ENST00000613964 233 ntBASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 EIF3FP1-201ENST00000613970 806 ntBASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 AF246928.1-201ENST00000623768 87 ntBASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
NECTIN3Q9NQS3 SCN1A-220ENST00000641603 12506 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL391994.1-201ENST00000254724 282 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RNA5SP123-201ENST00000363244 119 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RPL23AP29-201ENST00000397284 453 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 TMBIM7P-201ENST00000418074 855 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 NIPA2P1-201ENST00000426223 976 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 COX6CP13-201ENST00000428703 226 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 FABP7P2-201ENST00000429946 379 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL354714.3-201ENST00000447284 493 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 IFNWP4-201ENST00000453148 294 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RN7SL826P-201ENST00000479724 288 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RN7SL97P-201ENST00000486780 299 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 RPL5P23-201ENST00000496040 868 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC105313.1-201ENST00000509121 353 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 XKRY-201ENST00000510392 1100 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 SNORD116-26-201ENST00000516006 96 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 NMNAT1P1-201ENST00000554095 876 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC012435.1-202ENST00000568772 240 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AP005119.2-201ENST00000579735 1105 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 VN1R90P-201ENST00000595717 726 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AL353600.1-201ENST00000608148 251 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC243773.3-201ENST00000613270 256 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 FAM157B-203ENST00000639350 358 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 CASC19-222ENST00000641321 1173 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 AC063976.2-201ENST00000425667 3556 ntBASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NECTIN3Q9NQS3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 MAPK10-304ENST00000641341 3984 ntBASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 AC053481.2-202ENST00000582394 1500 ntBASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 Y_RNA.18-201ENST00000362461 102 ntBASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 RN7SKP104-201ENST00000362605 328 ntBASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 AP000580.1-201ENST00000404439 358 ntBASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 RPS15AP38-201ENST00000413110 372 ntBASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.72□□□□□ -1.65
NECTIN3Q9NQS3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms