Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC013470.3-201ENST00000420252 1194 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AL034379.1-201ENST00000423216 253 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 DPY19L1P2-201ENST00000426647 915 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 MTCO1P51-201ENST00000427672 1060 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AL138787.1-202ENST00000437804 898 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 MTCO3P16-201ENST00000454456 754 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 MIR3200-201ENST00000580767 85 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC010591.1-201ENST00000603941 649 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 CDY3P-201ENST00000454543 1618 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
KIAA1549Q9HCM3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AL450326.2-201ENST00000421913 1962 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 RNU1-33P-201ENST00000364249 162 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 MTND6P5-201ENST00000448266 512 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 MTND2P25-201ENST00000449028 610 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AGGF1P3-201ENST00000493675 1213 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC004069.2-201ENST00000505438 1114 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC005798.1-201ENST00000513715 387 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC005476.1-201ENST00000554427 397 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC092354.2-201ENST00000607786 514 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 AC090337.1-201ENST00000579651 2074 ntBASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
KIAA1549Q9HCM3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 RNA5SP72-201ENST00000364442 117 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 RPS29P4-201ENST00000414733 161 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL450263.2-201ENST00000439400 589 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL357552.1-201ENST00000445254 415 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL121576.1-201ENST00000556055 276 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC110741.2-201ENST00000605278 268 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 CR382285.2-201ENST00000624662 1495 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 RNA5SP235-201ENST00000365411 114 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 IPMKP1-201ENST00000425988 855 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 NPM1P39-201ENST00000449818 867 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC109925.1-201ENST00000478069 331 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 WBP1LP4-201ENST00000505043 344 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KIAA1549Q9HCM3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
KIAA1549Q9HCM3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms