Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC021242.1-201ENST00000507315 2035 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 SNRPEP3-201ENST00000338402 276 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 SNORA73.1-201ENST00000363107 205 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 RNU6-984P-201ENST00000363236 109 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 RNU6-441P-201ENST00000384545 106 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL355379.1-201ENST00000405542 640 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 MTND4P6-201ENST00000438297 472 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 OR7E125P-201ENST00000443450 846 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC092647.2-201ENST00000452998 253 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL356981.1-201ENST00000454879 684 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC010683.1-201ENST00000473673 378 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 HMGN2P25-201ENST00000486956 268 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 RN7SL591P-201ENST00000496150 292 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 SNX5P1-201ENST00000505757 1041 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC027308.1-201ENST00000517993 110 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 NPM1P6-201ENST00000521088 871 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AP000790.1-201ENST00000528891 737 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC063949.1-201ENST00000552900 865 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 MIR1269B-201ENST00000580405 75 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AP001981.2-201ENST00000603241 418 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL596327.1-201ENST00000603629 213 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC093765.1-201ENST00000603758 881 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 MTCYBP22-201ENST00000603788 447 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC064872.1-201ENST00000604823 1072 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 RNU6-88P-201ENST00000606801 100 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC024560.3-201ENST00000608482 349 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AP000894.4-201ENST00000610185 483 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL121612.2-201ENST00000612261 482 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC243773.3-201ENST00000613270 256 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC098679.4-201ENST00000624241 654 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 MTND5P24-201ENST00000438892 1767 ntBASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM54Q9BYV2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 LINC00561-201ENST00000565815 2738 ntBASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 AL390237.1-201ENST00000404226 1415 ntBASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM54Q9BYV2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 RN7SKP224-201ENST00000364140 325 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 RNA5SP88-201ENST00000365560 109 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 SNORA70.10-201ENST00000384515 134 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 RNU6-146P-201ENST00000384602 108 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 SNORA77-201ENST00000408716 125 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 TPMTP3-201ENST00000411928 735 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 RPL7P8-201ENST00000411964 730 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 HSFY4P-201ENST00000415994 1181 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 AC234779.1-201ENST00000425910 285 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 AC096632.1-201ENST00000427395 310 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 RPL36P19-201ENST00000430744 301 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 BMS1P19-201ENST00000433925 393 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 TMX2P1-201ENST00000436507 708 ntBASIC4.9□□□□□ -1.63
TRIM54Q9BYV2 RPS29P9-201ENST00000440360 171 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms