Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 SAGE3P-201ENST00000619800 1635 ntBASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KRTAP4-3Q9BYR4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ATP5A1P1-201ENST00000454088 1321 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC245060.6-201ENST00000624350 8420 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC015689.2-201ENST00000528172 1738 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 BX322650.1-201ENST00000332359 2143 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC003985.2-201ENST00000562268 1669 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 Y_RNA.62-201ENST00000362840 99 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 SNORD3E-201ENST00000362899 217 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 SNORD56.4-201ENST00000363883 71 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RNA5SP485-201ENST00000365053 119 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RNY4P28-201ENST00000365281 93 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC068538.1-201ENST00000376856 336 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 Y_RNA.530-201ENST00000384587 101 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 SNORD37.1-201ENST00000390968 65 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL080315.1-201ENST00000406055 466 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 MTCYBP2-201ENST00000407745 171 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR1204-201ENST00000408388 67 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 SNORA77.2-201ENST00000408571 112 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RN7SKP281-201ENST00000410472 352 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-121P-201ENST00000410525 99 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL591848.1-201ENST00000413092 322 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL035422.1-201ENST00000414193 397 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RPS12P23-201ENST00000419579 400 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC048351.1-201ENST00000420064 602 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 EIF4A1P1-201ENST00000420241 934 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC096920.1-201ENST00000423991 241 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 OSTCP4-201ENST00000424397 449 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC007283.2-201ENST00000424739 197 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC011742.1-201ENST00000431448 434 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AL512605.1-202ENST00000441919 381 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 TXNP2-201ENST00000443918 295 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 RN7SL552P-201ENST00000462094 276 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 COPS8P2-201ENST00000473228 627 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC008410.1-201ENST00000483777 339 ntBASIC2.23□□□□□ -2.05
KRTAP4-3Q9BYR4 AC108860.1-201ENST00000484521 383 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms