Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC011233.1-201ENST00000422812 283 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 IFNNP1-201ENST00000429219 553 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 MTND1P32-201ENST00000433043 938 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 YWHAZP7-201ENST00000436906 631 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 ELOCP8-201ENST00000439309 332 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 ELOCP15-201ENST00000442090 332 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AL592437.1-201ENST00000443781 492 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 TPTE2P6-202ENST00000445572 1007 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC233982.1-201ENST00000451247 436 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 PSMC1P13-201ENST00000458195 985 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 RPL12P22-201ENST00000519073 490 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC109635.6-201ENST00000525487 1113 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AL109766.1-201ENST00000555080 552 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 ACTR3BP3-201ENST00000565577 979 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC233702.9-201ENST00000581528 203 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC093765.1-201ENST00000603758 881 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC106791.2-201ENST00000604680 391 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AL021997.1-201ENST00000605757 193 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 uc_338.13-201ENST00000618243 179 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AP005019.3-201ENST00000620418 560 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC091931.1-201ENST00000623488 728 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AC019072.1-201ENST00000604535 1551 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 MCTS2P-201ENST00000394552 546 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RNU4-74P-201ENST00000411280 161 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 NRBF2P2-201ENST00000413087 861 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC004022.2-201ENST00000413824 193 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RPL7P53-201ENST00000421245 739 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 CENPIP1-201ENST00000425713 902 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AL157831.1-201ENST00000426134 473 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC091390.1-201ENST00000433904 331 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC129850.1-201ENST00000436203 508 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 TAF9P1-201ENST00000445421 515 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AL050341.1-201ENST00000447743 313 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 TAF9P2-201ENST00000454958 515 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 NECAP1P2-201ENST00000455668 727 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RPL7AP52-201ENST00000458096 790 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC104689.1-201ENST00000473356 768 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RN7SL459P-201ENST00000481078 302 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC068587.1-201ENST00000483613 781 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 LINC00888-204ENST00000487386 421 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC108145.1-201ENST00000503770 153 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RN7SKP141-201ENST00000516167 338 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 RNA5SP360-201ENST00000516555 118 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AL352979.3-201ENST00000553515 247 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.3□□□□□ -1.56
SALL3Q9BXA9 ZNF415P1-201ENST00000582279 1166 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AP001981.2-201ENST00000603241 418 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AL163642.2-201ENST00000604722 1019 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC103591.3-201ENST00000608684 209 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AP000254.1-201ENST00000609934 520 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AL021997.2-201ENST00000615674 271 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC010608.2-201ENST00000624830 470 ntBASIC5.3□□□□□ -1.56
SALL3Q9BXA9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms