Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CR383658.2-201ENST00000547576 1525 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 OR10J6P-201ENST00000289731 930 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RPL21P132-201ENST00000331267 462 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RNU6-582P-201ENST00000362989 107 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RNU6-433P-201ENST00000363216 104 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RNU6-1066P-201ENST00000363573 105 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 Y_RNA.248-201ENST00000364501 109 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC007066.1-201ENST00000392902 381 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 MIR1284-201ENST00000408337 120 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC007559.1-201ENST00000428736 355 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AL161722.2-201ENST00000434731 981 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 PPIAP17-201ENST00000438507 471 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 HMGB1P4-201ENST00000455362 567 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC091180.1-201ENST00000462104 372 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AL161747.1-201ENST00000480068 358 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC090013.1-201ENST00000485147 480 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 HMGN2P25-201ENST00000486956 268 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 IGBP1P5-201ENST00000507524 1000 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 SLC25A15P5-201ENST00000508033 253 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RNA5SP464-201ENST00000516251 108 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC012400.1-201ENST00000518452 381 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RPL23AP53-201ENST00000521854 457 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 MED28P5-201ENST00000528254 438 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC009063.1-201ENST00000563342 702 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 OR1F2P-201ENST00000570470 933 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 MIR1254-2-201ENST00000579553 63 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AL357078.3-201ENST00000607528 618 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AL589743.7-201ENST00000612637 233 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 uc_338.18-201ENST00000615451 175 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC018816.2-201ENST00000621460 353 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 CDC27P2-201ENST00000425026 1922 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 AC135352.1-201ENST00000506173 1418 ntBASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHAMP1Q96JM3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AC107982.1-201ENST00000507171 1300 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 TEX21P-201ENST00000447107 1476 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 SNORA70.10-201ENST00000384515 134 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AC009804.1-201ENST00000400949 179 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AL136131.1-201ENST00000406079 803 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 RAP1BP3-201ENST00000407180 549 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 RN7SKP27-201ENST00000410684 333 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 COX6CP13-201ENST00000428703 226 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 DNAJC19P4-201ENST00000440115 345 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 RPL7P59-201ENST00000447700 943 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 DNAJC19P1-201ENST00000455312 319 ntBASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHAMP1Q96JM3 AC010307.1-201ENST00000467206 836 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms