Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC139769.3-201ENST00000618383 175 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 U6.48-201ENST00000618523 106 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 AC068787.1-201ENST00000623908 691 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SEMA4DQ92854 AC015726.3-201ENST00000624501 418 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 BX649567.1-201ENST00000642071 1134 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.4□□□□□ -1.71
SEMA4DQ92854 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.4□□□□□ -1.71
SEMA4DQ92854 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.4□□□□□ -1.71
SEMA4DQ92854 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEMA4DQ92854 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEMA4DQ92854 MTND4P31-201ENST00000425607 1343 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 AP000756.2-201ENST00000624168 2567 ntBASIC4.4□□□□□ -1.71
SEMA4DQ92854 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SEMA4DQ92854 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SEMA4DQ92854 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 OR11H4-201ENST00000315409 1082 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 RNA5SP130-201ENST00000364431 114 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 MIR1303-201ENST00000408625 86 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 TPT1P2-201ENST00000413105 503 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 C4BPAP2-201ENST00000428434 478 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC002542.1-201ENST00000440683 193 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 RPS4XP4-201ENST00000443195 763 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 EIF4A1P11-201ENST00000451239 222 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 DNAJC19P8-201ENST00000452887 259 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 RPS6P2-201ENST00000454208 705 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 CCDC75P1-201ENST00000469247 791 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 TRBV8-2-201ENST00000475637 270 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 HPRT1P2-201ENST00000505250 544 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 IGKV2-38-201ENST00000517443 247 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AF186190.1-201ENST00000517470 480 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC124293.1-201ENST00000530034 493 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AL132857.1-201ENST00000555180 708 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 BNIP3P4-201ENST00000604946 565 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AL590392.1-201ENST00000604960 446 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC090948.2-201ENST00000607363 564 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC063944.3-201ENST00000609969 533 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC010608.2-201ENST00000624830 470 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 PHKBP1-201ENST00000450951 1951 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SEMA4DQ92854 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 MTCO1P6-201ENST00000481192 1384 ntBASIC4.39□□□□□ -1.71
SEMA4DQ92854 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEMA4DQ92854 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 AC009313.2-201ENST00000417893 1941 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.38□□□□□ -1.71
SEMA4DQ92854 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 AC011155.1-201ENST00000316512 456 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 RNU6-304P-201ENST00000364855 107 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEMA4DQ92854 RNU2-6P-201ENST00000411404 190 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 HSPE1P12-201ENST00000412576 301 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 MTATP6P20-201ENST00000414147 562 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 TAF13P2-201ENST00000416876 286 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 MTND4P3-201ENST00000417829 541 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 AL449283.1-202ENST00000418249 604 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 AC027644.1-201ENST00000419595 298 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.38□□□□□ -1.71
SEMA4DQ92854 GTF2IP3-201ENST00000433887 494 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 ELOCP18-201ENST00000434209 337 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.38□□□□□ -1.71
SEMA4DQ92854 ELOCP8-201ENST00000439309 332 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 ELOCP15-201ENST00000442090 332 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 RPS26P30-201ENST00000443431 335 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.38□□□□□ -1.71
SEMA4DQ92854 AL929288.2-201ENST00000446368 407 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 AC005002.1-201ENST00000447458 540 ntBASIC4.38□□□□□ -1.71
SEMA4DQ92854 MTND2P8-201ENST00000450555 1025 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms