Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MIR6715A-201ENST00000615929 79 ntBASIC5.6□□□□□ -1.51
TOPBP1Q92547 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TOPBP1Q92547 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TOPBP1Q92547 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TOPBP1Q92547 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TOPBP1Q92547 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
TOPBP1Q92547 AC007899.1-201ENST00000412776 775 ntBASIC5.59□□□□□ -1.51
TOPBP1Q92547 AC140076.1-201ENST00000449897 361 ntBASIC5.59□□□□□ -1.51
TOPBP1Q92547 NPM1P17-201ENST00000479221 602 ntBASIC5.59□□□□□ -1.51
TOPBP1Q92547 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TOPBP1Q92547 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.59□□□□□ -1.51
TOPBP1Q92547 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC5.59□□□□□ -1.51
TOPBP1Q92547 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.59□□□□□ -1.51
TOPBP1Q92547 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TOPBP1Q92547 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TOPBP1Q92547 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.59□□□□□ -1.51
TOPBP1Q92547 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.59□□□□□ -1.51
TOPBP1Q92547 PTP4A1P3-201ENST00000433661 420 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 HMGB3P9-201ENST00000441799 583 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC005798.1-201ENST00000513715 387 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOPBP1Q92547 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOPBP1Q92547 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOPBP1Q92547 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC000041.1-201ENST00000439655 175 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 HMGB3P14-201ENST00000494195 599 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 NDUFB9P3-201ENST00000521269 501 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 MIR2682-201ENST00000580305 110 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC022149.2-201ENST00000621061 203 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 AC018692.3-201ENST00000623929 123 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 AL137790.1-201ENST00000634283 177 ntBASIC5.58□□□□□ -1.52
TOPBP1Q92547 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOPBP1Q92547 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 AC083843.2-201ENST00000568248 6253 ntBASIC5.57□□□□□ -1.52
TOPBP1Q92547 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOPBP1Q92547 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOPBP1Q92547 RNA5SP235-201ENST00000365411 114 ntBASIC5.57□□□□□ -1.52
TOPBP1Q92547 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 S100A11P1-201ENST00000477525 312 ntBASIC5.57□□□□□ -1.52
TOPBP1Q92547 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 DUXAP6-201ENST00000553858 601 ntBASIC5.57□□□□□ -1.52
TOPBP1Q92547 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.57□□□□□ -1.52
TOPBP1Q92547 AC007390.2-201ENST00000606229 3803 ntBASIC5.57□□□□□ -1.52
TOPBP1Q92547 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOPBP1Q92547 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOPBP1Q92547 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.56□□□□□ -1.52
TOPBP1Q92547 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOPBP1Q92547 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TOPBP1Q92547 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOPBP1Q92547 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.56□□□□□ -1.52
TOPBP1Q92547 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOPBP1Q92547 SETP5-201ENST00000437270 562 ntBASIC5.56□□□□□ -1.52
TOPBP1Q92547 VN1R104P-201ENST00000505115 1009 ntBASIC5.56□□□□□ -1.52
TOPBP1Q92547 AC026333.2-201ENST00000542164 106 ntBASIC5.56□□□□□ -1.52
TOPBP1Q92547 AC005242.1-201ENST00000585658 438 ntBASIC5.56□□□□□ -1.52
TOPBP1Q92547 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOPBP1Q92547 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOPBP1Q92547 AL078595.2-201ENST00000605309 1780 ntBASIC5.56□□□□□ -1.52
TOPBP1Q92547 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOPBP1Q92547 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOPBP1Q92547 MIR513A2-201ENST00000385249 127 ntBASIC5.55□□□□□ -1.52
TOPBP1Q92547 OOSP1P1-201ENST00000423265 274 ntBASIC5.55□□□□□ -1.52
TOPBP1Q92547 RPL31P50-201ENST00000471002 296 ntBASIC5.55□□□□□ -1.52
TOPBP1Q92547 TCP11X3P-202ENST00000514289 1254 ntBASIC5.55□□□□□ -1.52
TOPBP1Q92547 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 AC103968.1-201ENST00000557841 573 ntBASIC5.55□□□□□ -1.52
TOPBP1Q92547 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 AL162713.1-201ENST00000604480 262 ntBASIC5.55□□□□□ -1.52
TOPBP1Q92547 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
TOPBP1Q92547 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOPBP1Q92547 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TOPBP1Q92547 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TOPBP1Q92547 AC074367.1-201ENST00000438685 1125 ntBASIC5.54□□□□□ -1.52
TOPBP1Q92547 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.54□□□□□ -1.52
TOPBP1Q92547 AC026801.2-201ENST00000515352 425 ntBASIC5.54□□□□□ -1.52
TOPBP1Q92547 CR383658.2-201ENST00000547576 1525 ntBASIC5.54□□□□□ -1.52
TOPBP1Q92547 AL133457.1-201ENST00000564251 987 ntBASIC5.54□□□□□ -1.52
TOPBP1Q92547 AC103881.1-201ENST00000603476 538 ntBASIC5.54□□□□□ -1.52
TOPBP1Q92547 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms