Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL049610.1-201ENST00000423374 372 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC112498.1-201ENST00000444401 332 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AP000936.2-201ENST00000447151 681 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 OR52J1P-201ENST00000450596 932 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC005229.2-201ENST00000456995 399 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC104689.1-201ENST00000473356 768 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC109462.1-201ENST00000491087 368 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 HIGD1AP6-201ENST00000521833 279 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AGGF1P4-201ENST00000568249 801 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 MIR4675-201ENST00000577898 77 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 FAM27B-201ENST00000610601 213 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC104073.3-201ENST00000610942 955 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 CR381572.2-201ENST00000624852 397 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 AC073869.7-201ENST00000640874 297 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 RARSP1-201ENST00000542842 1418 ntBASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ATG4AQ8WYN0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL031119.1-201ENST00000404707 1879 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL512646.1-201ENST00000269395 1077 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 OR5H15-201ENST00000383696 930 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 VDAC2P1-201ENST00000399358 958 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 FABP12P1-201ENST00000401911 322 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 PIGPP2-201ENST00000411569 458 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC068533.2-201ENST00000411872 306 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC114755.2-201ENST00000413520 361 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC093162.1-201ENST00000419682 124 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 RPS3AP44-201ENST00000425466 790 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL513175.1-201ENST00000431492 780 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 MTND1P30-201ENST00000441241 901 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC072039.1-201ENST00000477611 581 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC109486.1-201ENST00000486833 374 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC011352.3-201ENST00000505162 593 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC093281.2-201ENST00000510153 597 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 LTV1P1-201ENST00000510683 1237 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC091965.2-201ENST00000512324 613 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 BTF3P13-201ENST00000513224 490 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC110775.1-201ENST00000513721 462 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AP001207.1-201ENST00000524051 481 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 OR5AK1P-201ENST00000524837 922 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AL390726.5-202ENST00000564800 256 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 SUMO2P15-201ENST00000604285 278 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC006270.3-201ENST00000605967 1036 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 AC091946.2-201ENST00000606105 291 ntBASIC4.86□□□□□ -1.63
ATG4AQ8WYN0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms