Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR7703-201ENST00000620784 77 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 AC011330.2-201ENST00000621680 635 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 CDRT1-208ENST00000630868 794 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 ATE1-AS1-202ENST00000636460 506 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 LINC02211-204ENST00000642024 1070 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 MAPK10-253ENST00000641010 4072 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 AC016588.2-201ENST00000632484 3021 ntBASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC44A1Q8WWI5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL445437.1-201ENST00000623157 3087 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC097374.1-203ENST00000400783 485 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 MTCO2P31-201ENST00000402702 684 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL049697.2-201ENST00000403708 294 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL590139.1-201ENST00000416267 400 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 RPS24P7-201ENST00000416921 246 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 HMGB1P49-201ENST00000418882 569 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL009174.1-201ENST00000426577 416 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 RAC1P8-201ENST00000427086 527 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 HIGD1AP12-201ENST00000427832 281 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 RPL21P110-201ENST00000433345 446 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 H2AFZP6-201ENST00000444403 394 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 MTCO2P6-201ENST00000463134 685 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC053481.1-201ENST00000467217 306 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 RPL35AP15-201ENST00000468042 339 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 HIGD1AP5-201ENST00000529959 259 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AP001781.1-201ENST00000530977 207 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 MTND4P33-201ENST00000556706 766 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL357094.1-201ENST00000603845 844 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL583856.2-201ENST00000606298 543 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC018926.3-201ENST00000618841 406 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC027290.2-201ENST00000623210 18662 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 ASNSP1-204ENST00000641977 1664 ntBASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SLC44A1Q8WWI5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 RNA5SP513-201ENST00000364648 118 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 SNORA51.12-201ENST00000384448 134 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 TAS2R15P-201ENST00000390674 928 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC119751.3-201ENST00000399720 670 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 SNRPFP1-201ENST00000414761 252 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL161631.1-201ENST00000417933 486 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 NANOGP6-201ENST00000429190 847 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 MTND1P26-201ENST00000440488 538 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL591719.1-201ENST00000444669 744 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 NPM1P13-201ENST00000452663 865 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 RPL7P22-201ENST00000466005 733 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms