Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AL451086.1-201ENST00000605596 223 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 MIR6875-201ENST00000617506 72 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC093010.3-201ENST00000570269 15214 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 RAD1P1-201ENST00000231383 813 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 RNU1-75P-201ENST00000347264 129 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AL390879.2-203ENST00000426943 1121 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AP002371.1-201ENST00000463604 433 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC091153.1-201ENST00000466297 402 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 VN1R105P-201ENST00000486595 910 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC110792.1-201ENST00000491826 472 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC108064.1-201ENST00000513791 460 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC023632.4-201ENST00000517783 191 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC006130.2-201ENST00000586202 326 ntBASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC112Q8NEF3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 SAGE2P-201ENST00000420011 2126 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 RLIMP1-201ENST00000339626 1680 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 RN7SKP159-201ENST00000410657 292 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC096644.3-201ENST00000416788 338 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 OR8F1P-201ENST00000425243 930 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 RPL23AP4-201ENST00000427757 463 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 RPS4XP2-201ENST00000458402 793 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC020893.1-201ENST00000502452 580 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC021146.5-201ENST00000503544 545 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AP006245.1-201ENST00000522549 120 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 TRAV15-201ENST00000556680 249 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC027281.1-201ENST00000574178 758 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 BNIP3P38-201ENST00000601117 544 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AL606490.9-201ENST00000603331 271 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 AC018816.2-201ENST00000621460 353 ntBASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC112Q8NEF3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC112Q8NEF3 OR10AB1P-202ENST00000641219 1686 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC112Q8NEF3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC112Q8NEF3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 RPL32P23-201ENST00000397237 405 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 ZNF602P-201ENST00000405929 924 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AIMP1P1-201ENST00000418670 937 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC092013.1-201ENST00000438795 332 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 RPS3AP46-201ENST00000448352 682 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 RPL23AP44-201ENST00000482216 473 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 TXNP6-201ENST00000510190 310 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 RNU1-45P-201ENST00000517191 141 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 RN7SKP289-201ENST00000517244 295 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms