Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AL354798.1-201ENST00000622505 329 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC138393.1-206ENST00000540997 1886 ntBASIC4.2□□□□□ -1.74
CCDC65Q8IXS2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 GSTA12P-201ENST00000402398 508 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 HSPE1P8-201ENST00000406997 288 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 SETD6P1-201ENST00000444575 317 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AL627224.1-201ENST00000448334 444 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC103987.1-201ENST00000473394 348 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 RN7SL132P-201ENST00000478131 296 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AL139099.1-201ENST00000497398 403 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC092593.2-201ENST00000513866 913 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 MIMT1-201ENST00000597105 1050 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC005229.3-201ENST00000603438 323 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC067959.1-201ENST00000604334 379 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC135803.1-201ENST00000608748 565 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 AC079684.1-201ENST00000621405 437 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC65Q8IXS2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 RNU6-532P-201ENST00000384318 107 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 RNU6-31P-201ENST00000384388 108 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 MIR30B-201ENST00000384850 88 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 PTMAP5-201ENST00000393073 333 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC136624.1-201ENST00000400791 413 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 RPL31P52-201ENST00000407532 367 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 RPL26P37-201ENST00000411983 438 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 MTCO3P21-201ENST00000430791 643 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 NDUFA5P10-201ENST00000432147 357 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AL606490.7-201ENST00000433136 191 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AL157827.1-201ENST00000447622 132 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC010307.1-201ENST00000467206 836 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 ACTR6P1-201ENST00000514311 1104 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 NARSP2-201ENST00000518524 679 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC006960.3-201ENST00000561845 705 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC007687.1-201ENST00000602704 304 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC010680.4-201ENST00000605334 543 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 BX322635.1-201ENST00000605804 496 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC005344.1-201ENST00000613391 459 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC145207.9-201ENST00000623802 325 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 AC068724.3-201ENST00000625906 87 ntBASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC65Q8IXS2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AC025125.1-201ENST00000624743 1922 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 ASNSP1-204ENST00000641977 1664 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RNA5SP424-201ENST00000390988 115 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 RNF19BPX-201ENST00000426224 625 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL445528.1-201ENST00000426330 420 ntBASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC65Q8IXS2 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms