Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 ASNSP3-201ENST00000451989 1306 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 OR6K4P-201ENST00000423179 955 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AC073508.1-201ENST00000428866 656 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 RPS3AP43-201ENST00000479743 781 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 VN1R78P-201ENST00000597393 564 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 HCFC2P1-201ENST00000392864 1592 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 VN1R8P-201ENST00000407739 893 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AL139132.1-201ENST00000431587 344 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 BX119904.1-201ENST00000432026 348 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AF228730.2-201ENST00000438784 848 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AL513124.1-201ENST00000450410 614 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 PSMC1P13-201ENST00000458195 985 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AC108022.1-201ENST00000493466 478 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AL049840.6-202ENST00000603373 279 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 AC009159.1-201ENST00000618386 642 ntBASIC2.34□□□□□ -2.03
CSMD3Q7Z407 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD3Q7Z407 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 OR13C3-201ENST00000374781 1108 ntBASIC2.34□□□□□ -2.04
CSMD3Q7Z407 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 AL139413.1-201ENST00000421309 217 ntBASIC2.34□□□□□ -2.04
CSMD3Q7Z407 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 AC079089.3-201ENST00000603094 673 ntBASIC2.34□□□□□ -2.04
CSMD3Q7Z407 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 AC138965.3-201ENST00000623875 498 ntBASIC2.34□□□□□ -2.04
CSMD3Q7Z407 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 AC125336.1-201ENST00000508893 2827 ntBASIC2.34□□□□□ -2.04
CSMD3Q7Z407 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD3Q7Z407 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 RPS4XP8-201ENST00000402039 771 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 ARL4AP3-201ENST00000441452 574 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AP001207.2-201ENST00000519490 539 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC233702.9-201ENST00000581528 203 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC245100.7-201ENST00000609678 442 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AP000255.1-201ENST00000610276 676 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AL035425.3-201ENST00000564206 4996 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 RPL7AP73-201ENST00000413490 353 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 NPM1P13-201ENST00000452663 865 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 RPS29P26-201ENST00000477483 171 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC093755.1-201ENST00000512950 1023 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 PSMA2P1-201ENST00000526365 646 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 OR2AS2P-201ENST00000606902 342 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 OR7M1P-201ENST00000608946 533 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 RNA5SP42-201ENST00000364278 115 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 BNIP3P41-202ENST00000616656 861 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AC091905.1-201ENST00000624400 311 ntBASIC2.33□□□□□ -2.04
CSMD3Q7Z407 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD3Q7Z407 RNU1-18P-201ENST00000363062 164 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 U3.19-201ENST00000390893 196 ntBASIC2.32□□□□□ -2.04
CSMD3Q7Z407 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms