Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AL031313.1-201ENST00000448435 256 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 RPS15AP1-201ENST00000457423 391 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC090071.1-201ENST00000507713 644 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC048346.1-201ENST00000510247 144 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 KRT19P6-201ENST00000510983 209 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC093752.1-206ENST00000511823 336 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 RN7SKP122-201ENST00000515923 296 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 RNA5SP446-201ENST00000515955 82 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC124068.1-201ENST00000563131 678 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC005962.2-201ENST00000611427 652 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AL592148.2-201ENST00000612210 372 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC006338.2-201ENST00000616864 791 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 AC000123.2-201ENST00000623124 461 ntBASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNX30Q5VWJ9 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC009951.1-201ENST00000623674 2614 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 EIF2AP4-201ENST00000424793 1781 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 FAM3C2-201ENST00000312214 681 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 SNORA70.2-201ENST00000364506 135 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 SNORA72.3-201ENST00000365074 132 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AL450992.3-201ENST00000413192 568 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AL139095.3-201ENST00000419672 1203 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 MTND2P9-201ENST00000422293 931 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 RAB11AP1-201ENST00000442978 646 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 HMGB3P6-201ENST00000444896 598 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 Z99714.1-201ENST00000450463 807 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 MRPL42P4-201ENST00000453267 443 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 TVP23BP2-201ENST00000455082 615 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC133473.1-201ENST00000455173 299 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 RPS26P28-201ENST00000470806 348 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 NDUFB4P12-201ENST00000513465 390 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 RNA5SP135-201ENST00000517019 125 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 PTP4A1P6-201ENST00000531034 478 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 HMGB3P26-201ENST00000560051 582 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AL121834.1-201ENST00000572284 509 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC245884.10-201ENST00000597355 337 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AP005137.2-201ENST00000609238 400 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 CYCSP41-201ENST00000616920 296 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC123767.1-202ENST00000620407 817 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AP006248.2-201ENST00000623309 592 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC011944.2-201ENST00000624440 683 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 OR4G3P-201ENST00000633500 913 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 FAM157B-203ENST00000639350 358 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 ZNF663P-202ENST00000641770 1131 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC106754.1-201ENST00000562632 1513 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 AC025125.1-201ENST00000624743 1922 ntBASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SNX30Q5VWJ9 MTND5P28-201ENST00000438005 1594 ntBASIC4.65□□□□□ -1.66
SNX30Q5VWJ9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms