Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC109445.1-201ENST00000512356 383 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC084824.1-201ENST00000550917 1005 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC023161.2-201ENST00000551218 780 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC135628.1-201ENST00000568867 534 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC008687.2-201ENST00000597865 520 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC135507.1-201ENST00000607214 561 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC072039.2-201ENST00000608883 439 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AL607023.1-201ENST00000620045 248 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC092184.1-201ENST00000625042 715 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 OR51H2P-202ENST00000641424 3046 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 AC100778.3-201ENST00000580060 1750 ntBASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SLC44A4Q53GD3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AP001273.1-201ENST00000624493 3152 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 RNU6-1151P-201ENST00000384684 107 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 RNU2-65P-201ENST00000410162 185 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 COX5BP7-201ENST00000414780 274 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC098592.1-201ENST00000419352 333 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL365203.2-201ENST00000423444 196 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 RPL7AP49-201ENST00000429522 581 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL591438.1-201ENST00000433508 581 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC093414.1-201ENST00000434712 514 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 YWHAZP7-201ENST00000436906 631 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 ACTR3P2-201ENST00000439585 1257 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 NF1P3-201ENST00000457709 450 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 MTND1P16-201ENST00000465177 898 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC006511.1-201ENST00000470614 315 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AF213884.2-201ENST00000510417 903 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 MTCYBP37-201ENST00000510642 1133 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AP001207.1-201ENST00000524051 481 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 MIR4277-201ENST00000578298 84 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AL020997.2-201ENST00000602607 184 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC087752.4-201ENST00000605911 462 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC022031.1-201ENST00000585985 2593 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 AC097461.1-201ENST00000568928 2821 ntBASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SLC44A4Q53GD3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 OR4K15-201ENST00000305051 1216 ntBASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 OR1L6-202ENST00000373684 1044 ntBASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 AL049693.1-201ENST00000402760 611 ntBASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 Y_RNA.619-201ENST00000410951 90 ntBASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 PRELID3BP11-201ENST00000414230 479 ntBASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A4Q53GD3 BOLA3P4-201ENST00000418151 400 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms