Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL139811.1-201ENST00000424779 2299 ntBASIC3.87□□□□□ -1.79
PTPN20Q4JDL3 AC083899.2-201ENST00000423285 1376 ntBASIC3.87□□□□□ -1.79
PTPN20Q4JDL3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 SAGE2P-201ENST00000420011 2126 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC073073.2-201ENST00000609827 2578 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 SNORD3H-201ENST00000384486 214 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 RNA5SP239-201ENST00000410218 129 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 CYCSP19-201ENST00000411715 316 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 MTND4P11-201ENST00000417020 1058 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 HMGB3P5-201ENST00000428894 612 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC007688.1-201ENST00000475592 759 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 SNORA70.17-201ENST00000516449 133 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC008083.2-201ENST00000546707 476 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC005021.1-201ENST00000608730 355 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 AC119674.1-207ENST00000641355 633 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 OR6C71P-202ENST00000641886 1107 ntBASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN20Q4JDL3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 Y_RNA.126-201ENST00000363382 111 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 RNU6-283P-201ENST00000364788 107 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 RNU6-244P-201ENST00000391028 104 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 RPS12P23-201ENST00000419579 400 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 RPL23AP12-201ENST00000467573 473 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC020898.1-201ENST00000474167 787 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC023050.1-201ENST00000498198 304 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 IGHV3-32-201ENST00000519182 355 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC022784.5-201ENST00000522241 437 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AL121766.1-201ENST00000547436 487 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AP003117.1-201ENST00000602771 554 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC096656.1-201ENST00000623826 1364 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC027287.1-201ENST00000553115 1453 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 PNPT1P2-201ENST00000456768 2050 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 MTCO1P8-201ENST00000416914 1523 ntBASIC3.85□□□□□ -1.79
PTPN20Q4JDL3 AC007656.2-201ENST00000624902 4547 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 RNA5SP124-201ENST00000362739 110 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 RNU6-666P-201ENST00000363499 107 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 RNA5SP51-201ENST00000364750 119 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC245054.1-201ENST00000420944 258 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 RRM2P4-201ENST00000441721 562 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC018635.1-201ENST00000468292 1030 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 NPM1P17-201ENST00000479221 602 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 AC002456.2-201ENST00000509356 380 ntBASIC3.84□□□□□ -1.79
PTPN20Q4JDL3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms