Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC130650.2-201ENST00000618736 2403 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 RNA5SP455-201ENST00000365190 119 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 RNU6-723P-201ENST00000383973 107 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 NOP56P2-201ENST00000447491 769 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 IFNWP4-201ENST00000453148 294 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 GYG1P1-201ENST00000460864 698 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 IGLV2-34-201ENST00000490007 283 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC087276.1-201ENST00000529659 480 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AL390334.1-201ENST00000556395 450 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 ELOCP28-201ENST00000590044 317 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC011487.3-201ENST00000593607 453 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC092354.1-201ENST00000606057 376 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC106028.5-201ENST00000610332 395 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC087385.3-201ENST00000620477 187 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AC012618.3-205ENST00000637896 1496 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AL022393.1-201ENST00000625142 1677 ntBASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC000374.1-201ENST00000434698 1745 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AL592437.2-201ENST00000421655 2434 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 OR9G4-201ENST00000302957 984 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 RNU6-374P-201ENST00000364146 108 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 EIF5P1-201ENST00000400019 1231 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 MIR1182-201ENST00000408363 97 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 EIF4A1P3-201ENST00000411521 244 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC016907.1-201ENST00000419483 435 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AL138785.1-201ENST00000425821 331 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 MTCO3P5-201ENST00000433620 714 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 TMX2P1-201ENST00000436507 708 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC104073.1-201ENST00000451988 151 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 OR6C5P-201ENST00000452388 923 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 ARPC3P2-201ENST00000457786 533 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 RPL7P16-201ENST00000479738 738 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC080014.1-201ENST00000496877 1201 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 NDUFA5P2-201ENST00000519723 344 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 HIGD1AP10-201ENST00000527837 282 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC024909.2-201ENST00000553035 286 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 MIR4691-201ENST00000583764 85 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC087283.1-201ENST00000604029 1074 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 AL158063.1-201ENST00000615349 536 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 uc_338.18-201ENST00000615451 175 ntBASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC144BQ3MJ40 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RN7SKP149-201ENST00000363008 344 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 RNU1-130P-201ENST00000363930 160 ntBASIC5.91□□□□□ -1.46
CCDC144BQ3MJ40 COX6B1P1-201ENST00000415962 213 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms