Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL450270.1-201ENST00000606160 391 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 MIR6868-201ENST00000611215 58 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC243654.2-201ENST00000612843 443 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC011472.4-201ENST00000615848 491 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 AC004943.3-201ENST00000624116 600 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 OR5BE1P-202ENST00000641168 1176 ntBASIC3.57□□□□□ -1.84
RFX4Q33E94 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX4Q33E94 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
RFX4Q33E94 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFX4Q33E94 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 ASNSP1-204ENST00000641977 1664 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC096656.1-201ENST00000623826 1364 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RNU1-32P-201ENST00000363937 159 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RNA5SP399-201ENST00000364003 117 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RNU6-185P-201ENST00000384421 107 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AL356057.1-202ENST00000402263 756 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RN7SKP33-201ENST00000410942 340 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 USP9YP19-201ENST00000412165 485 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC013404.1-201ENST00000413068 249 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 TPT1P2-201ENST00000413105 503 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC092832.1-201ENST00000422934 400 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX4Q33E94 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.56□□□□□ -1.84
RFX4Q33E94 HMGB1P26-201ENST00000452520 628 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RNU7-27P-201ENST00000459281 62 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RPL7P48-201ENST00000461513 746 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC006511.1-201ENST00000470614 315 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC108729.2-201ENST00000476543 840 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC093663.2-201ENST00000484625 313 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 RPL23AP73-201ENST00000492507 471 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC106806.2-201ENST00000509365 500 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 Vault.1-201ENST00000516474 102 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 OR4A12P-201ENST00000530847 918 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 MIR4738-201ENST00000579134 87 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 CBX3P2-202ENST00000583365 535 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.56□□□□□ -1.84
RFX4Q33E94 KLKP1-201ENST00000595979 403 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 RMST_8.1-201ENST00000610287 165 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC099669.2-201ENST00000616549 437 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX4Q33E94 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC007342.8-201ENST00000623278 678 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 AC010435.1-201ENST00000623353 1177 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
RFX4Q33E94 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.56□□□□□ -1.84
RFX4Q33E94 AC025125.1-201ENST00000624743 1922 ntBASIC3.56□□□□□ -1.84
RFX4Q33E94 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RFX4Q33E94 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFX4Q33E94 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX4Q33E94 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX4Q33E94 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RFX4Q33E94 AC005261.4-201ENST00000600047 1385 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 DCAF13P3-201ENST00000561147 1334 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX4Q33E94 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
RFX4Q33E94 MIR124-3-201ENST00000384866 87 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 MIR184-201ENST00000384962 84 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFX4Q33E94 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.55□□□□□ -1.84
RFX4Q33E94 RPL18P10-201ENST00000425606 538 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 AC006989.1-201ENST00000427212 131 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 AL160175.1-201ENST00000428124 247 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.55□□□□□ -1.84
RFX4Q33E94 USP9YP7-201ENST00000436723 430 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.55□□□□□ -1.84
RFX4Q33E94 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RFX4Q33E94 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RFX4Q33E94 RPS11P1-201ENST00000451072 473 ntBASIC3.55□□□□□ -1.84
RFX4Q33E94 USP9YP32-201ENST00000452432 430 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms