Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AL133244.1-201ENST00000456007 258 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AP1S2P1-201ENST00000457344 379 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 RN7SL552P-201ENST00000462094 276 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 RN7SL352P-201ENST00000466002 277 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 RPL7P39-201ENST00000481157 744 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 RPL32P9-201ENST00000487963 407 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 TMEM248P1-201ENST00000510579 951 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 RNU6-1314P-201ENST00000517139 104 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 SUB1P1-201ENST00000524415 382 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 ZNF705CP-201ENST00000530515 889 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDH1Q08174 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AL356432.3-201ENST00000568952 465 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 MIR3171-201ENST00000584270 74 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH1Q08174 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AL355802.3-201ENST00000607571 545 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 MIR6780B-201ENST00000610307 79 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDH1Q08174 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PCDH1Q08174 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 AL118496.1-201ENST00000440201 1812 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC006020.1-201ENST00000420179 1854 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH1Q08174 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 AC022325.1-201ENST00000502748 2199 ntBASIC5.89□□□□□ -1.47
PCDH1Q08174 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH1Q08174 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 DNM1P47-203ENST00000571780 12667 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 HSPA8P18-201ENST00000439846 1928 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 SNORA21-201ENST00000362423 132 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 RNA5SP394-201ENST00000364216 119 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 SNORA63C-201ENST00000364578 129 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 Y_RNA.255-201ENST00000364581 97 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 GNG5P2-201ENST00000372054 207 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 SNORA51.6-201ENST00000384151 125 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 RNU6-441P-201ENST00000384545 106 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 MIR649-201ENST00000384843 97 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 MIR1-2-201ENST00000384961 85 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AL096800.1-201ENST00000405326 893 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 MYL6P5-201ENST00000412707 459 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AC245096.1-201ENST00000413104 546 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AL035422.1-201ENST00000414193 397 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC006548.1-201ENST00000427470 102 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 YWHAZP8-201ENST00000436935 731 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AL049734.2-201ENST00000441066 616 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC097359.1-201ENST00000447946 463 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 SNORD19B-201ENST00000459623 84 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 MTCO2P29-201ENST00000465212 189 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 RN7SL568P-201ENST00000493069 298 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 RN7SL362P-201ENST00000494228 267 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 RNU4-49P-201ENST00000516080 140 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 RN7SKP70-201ENST00000516655 271 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AL353997.4-201ENST00000586196 166 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC021646.1-201ENST00000605469 484 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH1Q08174 AC243654.2-201ENST00000612843 443 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 AC079684.1-201ENST00000621405 437 ntBASIC5.88□□□□□ -1.47
PCDH1Q08174 CR381572.1-201ENST00000625098 102 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms