Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RN7SKP209-201ENST00000516888 304 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC084824.1-201ENST00000550917 1005 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 MIR4286-201ENST00000580651 93 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 VN1R85P-201ENST00000601587 426 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL606490.9-201ENST00000603331 271 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL355802.4-201ENST00000607635 548 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC135803.1-201ENST00000608748 565 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC024941.1-201ENST00000612250 334 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC243654.2-201ENST00000612843 443 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC104307.1-201ENST00000616142 196 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AL162233.1-201ENST00000620014 944 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AP003072.4-201ENST00000624580 310 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC116563.2-201ENST00000624751 535 ntBASIC3.62□□□□□ -1.83
HMGCS1Q01581 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCS1Q01581 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCS1Q01581 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS1Q01581 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS1Q01581 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC007685.1-201ENST00000329806 452 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 U1.1-201ENST00000384101 164 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 SNORA57.1-201ENST00000391227 145 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 CCNB2P1-201ENST00000399411 1150 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 MIR1183-201ENST00000408856 89 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS1Q01581 CR848007.2-201ENST00000424918 787 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 FTH1P6-201ENST00000430768 320 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 MTND4LP7-201ENST00000431728 294 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 SKP1P1-201ENST00000438081 489 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 BTBD7P2-201ENST00000441962 620 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 OR9M1P-201ENST00000459641 921 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC092045.1-201ENST00000495716 1231 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 SCARNA14-201ENST00000516903 136 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 HMGB1P46-201ENST00000520062 610 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC008083.2-201ENST00000546707 476 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AL161713.1-201ENST00000555538 145 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC023158.1-201ENST00000561632 1025 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC053481.4-201ENST00000583164 216 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC083899.3-201ENST00000603413 594 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 AL354696.1-201ENST00000614652 497 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 OR6C71P-202ENST00000641886 1107 ntBASIC3.61□□□□□ -1.83
HMGCS1Q01581 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS1Q01581 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCS1Q01581 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMGCS1Q01581 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS1Q01581 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCS1Q01581 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 AL356967.1-201ENST00000406305 431 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 RPL7P4-203ENST00000430239 730 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 MTCO3P20-201ENST00000454926 688 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 VN1R105P-201ENST00000486595 910 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 AC023050.1-201ENST00000498198 304 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 AC141257.3-201ENST00000572906 215 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCS1Q01581 AC022916.3-201ENST00000592961 742 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 MTCO3P22-201ENST00000603219 784 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 CR589904.2-201ENST00000612533 440 ntBASIC3.6□□□□□ -1.83
HMGCS1Q01581 FP236240.3-201ENST00000623061 327 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms