Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL121834.1-202ENST00000404494 277 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 RN7SKP177-201ENST00000410567 355 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNA1P78396 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNA1P78396 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 Z85994.2-201ENST00000434327 452 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNA1P78396 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNA1P78396 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.4□□□□□ -1.71
CCNA1P78396 RPL21P71-201ENST00000465598 459 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 PLGLA-201ENST00000465668 449 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 RN7SL293P-201ENST00000481765 281 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 AC012170.1-201ENST00000495139 359 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 AC021087.2-201ENST00000504656 1203 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNA1P78396 IGLV3-26-201ENST00000520756 302 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.4□□□□□ -1.71
CCNA1P78396 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
CCNA1P78396 AC135001.1-201ENST00000544546 283 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.4□□□□□ -1.71
CCNA1P78396 AL049870.4-201ENST00000555741 486 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 AL354760.1-201ENST00000608357 643 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNA1P78396 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCNA1P78396 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNA1P78396 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNA1P78396 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCNA1P78396 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNA1P78396 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.4□□□□□ -1.71
CCNA1P78396 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCNA1P78396 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNA1P78396 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNA1P78396 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNA1P78396 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNA1P78396 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNA1P78396 RNU6-185P-201ENST00000384421 107 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNA1P78396 RPS12P23-201ENST00000419579 400 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 RNF19BPX-201ENST00000426224 625 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 Z74696.2-201ENST00000436514 498 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNA1P78396 RPS3AP46-201ENST00000448352 682 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNA1P78396 SYT14P1-201ENST00000481459 721 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AC017037.1-201ENST00000508460 471 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AC074250.1-201ENST00000511117 192 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.39□□□□□ -1.71
CCNA1P78396 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.39□□□□□ -1.71
CCNA1P78396 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNA1P78396 AC007991.1-201ENST00000522680 631 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.39□□□□□ -1.71
CCNA1P78396 OR4U1P-201ENST00000554958 912 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNA1P78396 AL121834.1-201ENST00000572284 509 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AC005412.1-201ENST00000580812 1049 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.39□□□□□ -1.71
CCNA1P78396 ELOCP35-201ENST00000604289 336 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 BNIP3P19-201ENST00000605397 577 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AL591424.2-201ENST00000617023 128 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 AC055839.1-201ENST00000634467 498 ntBASIC4.39□□□□□ -1.71
CCNA1P78396 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.39□□□□□ -1.71
CCNA1P78396 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCNA1P78396 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNA1P78396 AC008725.1-201ENST00000605123 2263 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNA1P78396 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 AL353743.4-201ENST00000422653 1547 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCNA1P78396 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNA1P78396 MIR124-3-201ENST00000384866 87 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCNA1P78396 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 RPS7P15-201ENST00000415804 584 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 OR2X1P-201ENST00000421144 687 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AL031736.2-201ENST00000426573 787 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 CYCSP35-201ENST00000451978 304 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 WBP1LP4-201ENST00000505043 344 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 PCNAP1-201ENST00000505363 709 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNA1P78396 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNA1P78396 PPBPP1-201ENST00000510807 373 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 OR5H4P-201ENST00000510851 923 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 IGKV2-38-201ENST00000517443 247 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNA1P78396 AC084033.1-201ENST00000550830 633 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AC007424.1-203ENST00000554613 687 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.38□□□□□ -1.71
CCNA1P78396 AC007599.1-201ENST00000568688 1174 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AL160281.1-201ENST00000605307 311 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AC078899.5-201ENST00000612475 178 ntBASIC4.38□□□□□ -1.71
CCNA1P78396 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.38□□□□□ -1.71
CCNA1P78396 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.38□□□□□ -1.71
CCNA1P78396 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms