Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.37□□□□□ -1.55
RHBDL3P58872 MTCO2P23-201ENST00000425216 680 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 RPS12P10-201ENST00000427031 377 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 RRM2P4-201ENST00000441721 562 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 CYCSP34-201ENST00000458172 304 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDL3P58872 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDL3P58872 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 TRAV8-5-201ENST00000537369 341 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC026979.4-201ENST00000606555 645 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC068787.1-201ENST00000623908 691 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 AC068724.3-201ENST00000625906 87 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RHBDL3P58872 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RHBDL3P58872 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDL3P58872 AL359922.3-201ENST00000624779 1670 ntBASIC5.37□□□□□ -1.55
RHBDL3P58872 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 AC117529.2-201ENST00000512159 2068 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AL356489.2-201ENST00000566968 3528 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.36□□□□□ -1.55
RHBDL3P58872 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.36□□□□□ -1.55
RHBDL3P58872 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 OR4A15-201ENST00000314706 1035 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 snoZ40.1-201ENST00000364540 72 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 RNA5SP515-201ENST00000364570 118 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 RNU6-1226P-201ENST00000384317 107 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 SNORD65.1-201ENST00000390889 71 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AL023807.1-201ENST00000407932 359 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDL3P58872 OR2AH1P-201ENST00000425717 928 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 EEF1A1P39-201ENST00000440791 250 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 RPL23AP16-201ENST00000441715 421 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 TCEA1P3-201ENST00000443005 880 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDL3P58872 AL589880.1-201ENST00000448271 287 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AL645939.1-201ENST00000453429 797 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 TRBV26-201ENST00000456572 344 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 MTCO3P2-201ENST00000457365 171 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.36□□□□□ -1.55
RHBDL3P58872 AC020890.1-201ENST00000491837 504 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AC012170.1-201ENST00000495139 359 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDL3P58872 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 HMGB1P19-201ENST00000517578 577 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDL3P58872 OR4A45P-201ENST00000529954 901 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 ZNF705CP-201ENST00000530515 889 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.36□□□□□ -1.55
RHBDL3P58872 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.36□□□□□ -1.55
RHBDL3P58872 MTCO2P2-201ENST00000591258 225 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RHBDL3P58872 AC103792.1-201ENST00000603591 919 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AL035411.2-201ENST00000604022 421 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 AC024257.5-201ENST00000612739 531 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDL3P58872 LINC02211-204ENST00000642024 1070 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDL3P58872 PABPC1P7-201ENST00000413177 1513 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.36□□□□□ -1.55
RHBDL3P58872 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RHBDL3P58872 AC112198.2-201ENST00000426589 6996 ntBASIC5.36□□□□□ -1.55
RHBDL3P58872 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDL3P58872 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RHBDL3P58872 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDL3P58872 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDL3P58872 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDL3P58872 SNORA11-201ENST00000408789 128 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 SNRPFP1-201ENST00000414761 252 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDL3P58872 BOLA3P4-201ENST00000418151 400 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 RPS3AP37-201ENST00000419176 745 ntBASIC5.35□□□□□ -1.55
RHBDL3P58872 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.35□□□□□ -1.55
RHBDL3P58872 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms