Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CR848007.1-201ENST00000442354 1699 ntBASIC4.8□□□□□ -1.64
CLRN1P58418 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CLRN1P58418 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLRN1P58418 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLRN1P58418 ADAM24P-201ENST00000398655 2101 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC006484.1-201ENST00000435086 1884 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC007342.5-201ENST00000571340 2142 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 NLRP3P1-201ENST00000622303 1785 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 OR11H4-201ENST00000315409 1082 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 RNU4-12P-201ENST00000365233 139 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 Y_RNA.390-201ENST00000383932 102 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 SNORA16A-201ENST00000384342 137 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLRN1P58418 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC245052.5-201ENST00000416320 649 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AL513174.1-201ENST00000423182 629 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 SRSF1P1-201ENST00000424058 520 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AL390119.1-201ENST00000440329 312 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 PGBD4P3-201ENST00000440731 581 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 RPL7P36-201ENST00000444633 681 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 WASF1P1-201ENST00000447560 1131 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 Z99127.3-201ENST00000448158 395 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 CBX1P2-201ENST00000453841 458 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC090142.1-201ENST00000465776 462 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 TMEM251P1-201ENST00000503717 318 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC108475.1-201ENST00000507880 950 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 KCTD9P2-201ENST00000512203 1013 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 RNU6-430P-201ENST00000517078 107 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 CYCSP28-201ENST00000534284 321 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 SULT1C2P2-201ENST00000562517 294 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AL133457.1-201ENST00000564251 987 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.79□□□□□ -1.64
CLRN1P58418 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 AC078899.5-201ENST00000612475 178 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AC099654.6-201ENST00000636487 512 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLRN1P58418 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLRN1P58418 AL078621.3-201ENST00000623707 2042 ntBASIC4.79□□□□□ -1.64
CLRN1P58418 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.79□□□□□ -1.64
CLRN1P58418 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.78□□□□□ -1.64
CLRN1P58418 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 RN7SKP124-201ENST00000364730 341 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms