Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC083899.3-201ENST00000603413 594 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 RNU4-89P-201ENST00000607443 133 ntBASIC3.76□□□□□ -1.81
PKNOX1P55347 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.76□□□□□ -1.81
PKNOX1P55347 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.76□□□□□ -1.81
PKNOX1P55347 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.76□□□□□ -1.81
PKNOX1P55347 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.76□□□□□ -1.81
PKNOX1P55347 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKNOX1P55347 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKNOX1P55347 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.75□□□□□ -1.81
PKNOX1P55347 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.75□□□□□ -1.81
PKNOX1P55347 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKNOX1P55347 RNA5SP443-201ENST00000363083 132 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 RNU1-32P-201ENST00000363937 159 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 RNA5SP130-201ENST00000364431 114 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.75□□□□□ -1.81
PKNOX1P55347 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKNOX1P55347 MIR585-201ENST00000384887 94 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.75□□□□□ -1.81
PKNOX1P55347 TBCAP1-201ENST00000436520 327 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AL353093.1-201ENST00000441292 436 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AC084198.1-201ENST00000477747 402 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AL161747.1-201ENST00000480068 358 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 RPS3AP6-201ENST00000484430 795 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 RPS23P1-201ENST00000491662 432 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AC021146.1-201ENST00000511202 716 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 RN7SKP83-201ENST00000516512 178 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 RN7SKP209-201ENST00000516888 304 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 NDUFA5P2-201ENST00000519723 344 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.75□□□□□ -1.81
PKNOX1P55347 OR4C2P-201ENST00000530855 1064 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.75□□□□□ -1.81
PKNOX1P55347 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.75□□□□□ -1.81
PKNOX1P55347 AL121576.1-201ENST00000556055 276 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.75□□□□□ -1.81
PKNOX1P55347 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.75□□□□□ -1.81
PKNOX1P55347 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
PKNOX1P55347 MIR4458-201ENST00000578872 75 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AL137849.1-201ENST00000604767 169 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 MIR1264-201ENST00000616374 69 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AC090506.2-201ENST00000624521 419 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.75□□□□□ -1.81
PKNOX1P55347 MFSD8-220ENST00000641243 1422 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 AC025125.1-201ENST00000624743 1922 ntBASIC3.75□□□□□ -1.81
PKNOX1P55347 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKNOX1P55347 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.75□□□□□ -1.81
PKNOX1P55347 MAPK10-372ENST00000641954 3413 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.74□□□□□ -1.81
PKNOX1P55347 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC100871.1-201ENST00000507871 1456 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC066616.2-201ENST00000559334 1481 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKNOX1P55347 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKNOX1P55347 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
PKNOX1P55347 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKNOX1P55347 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PKNOX1P55347 HMGB1P10-201ENST00000395823 563 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.74□□□□□ -1.81
PKNOX1P55347 OR8G2P-201ENST00000412796 908 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 TCEA1P4-201ENST00000415066 844 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 Z97055.1-201ENST00000419730 712 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.74□□□□□ -1.81
PKNOX1P55347 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.74□□□□□ -1.81
PKNOX1P55347 MTCYBP21-201ENST00000443300 1113 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC097499.1-201ENST00000444277 208 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC006326.1-201ENST00000445465 787 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC069540.1-201ENST00000446320 988 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.74□□□□□ -1.81
PKNOX1P55347 ANP32BP2-201ENST00000454525 545 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC087385.1-201ENST00000475062 312 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC110792.1-201ENST00000491826 472 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 IGKV2-36-201ENST00000519999 223 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 MRPL49P2-201ENST00000521066 465 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 CIR1P1-201ENST00000524055 1133 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKNOX1P55347 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.74□□□□□ -1.81
PKNOX1P55347 OR4U1P-201ENST00000554958 912 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.74□□□□□ -1.81
PKNOX1P55347 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.74□□□□□ -1.81
PKNOX1P55347 MIR6820-201ENST00000611508 62 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 U6.48-201ENST00000618523 106 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 MIR7641-1-201ENST00000627518 61 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 FRG1DP-201ENST00000635586 771 ntBASIC3.74□□□□□ -1.81
PKNOX1P55347 OR6C71P-202ENST00000641886 1107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms