Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PDX1P52945 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDX1P52945 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PDX1P52945 NXPH1-205ENST00000602349 1953 ntBASIC4.2□□□□□ -1.74
PDX1P52945 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDX1P52945 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDX1P52945 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
PDX1P52945 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PDX1P52945 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.19□□□□□ -1.74
PDX1P52945 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 ANKRD36P1-201ENST00000344424 659 ntBASIC4.19□□□□□ -1.74
PDX1P52945 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
PDX1P52945 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDX1P52945 Y_RNA.472-201ENST00000384322 102 ntBASIC4.19□□□□□ -1.74
PDX1P52945 RNU6-603P-201ENST00000411403 107 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC009302.1-201ENST00000417147 390 ntBASIC4.19□□□□□ -1.74
PDX1P52945 MFSD13B-201ENST00000420133 1290 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC004448.2-201ENST00000422360 586 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC092648.1-201ENST00000425870 423 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC002542.1-201ENST00000440683 193 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.19□□□□□ -1.74
PDX1P52945 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.19□□□□□ -1.74
PDX1P52945 BX248409.1-201ENST00000455497 255 ntBASIC4.19□□□□□ -1.74
PDX1P52945 RPL23AP65-201ENST00000475608 468 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AL132838.2-201ENST00000492041 314 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC108064.1-201ENST00000513791 460 ntBASIC4.19□□□□□ -1.74
PDX1P52945 COX6B1P6-201ENST00000522347 255 ntBASIC4.19□□□□□ -1.74
PDX1P52945 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.19□□□□□ -1.74
PDX1P52945 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.19□□□□□ -1.74
PDX1P52945 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.19□□□□□ -1.74
PDX1P52945 MIR4429-201ENST00000580105 73 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC090312.2-201ENST00000582687 378 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.19□□□□□ -1.74
PDX1P52945 AC006116.5-201ENST00000591936 559 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.19□□□□□ -1.74
PDX1P52945 AC002487.1-201ENST00000604565 994 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.19□□□□□ -1.74
PDX1P52945 AL355816.1-201ENST00000607951 118 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.19□□□□□ -1.74
PDX1P52945 VN1R74P-201ENST00000613259 503 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AL121895.2-201ENST00000619558 447 ntBASIC4.19□□□□□ -1.74
PDX1P52945 AP002967.1-201ENST00000624203 539 ntBASIC4.19□□□□□ -1.74
PDX1P52945 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.19□□□□□ -1.74
PDX1P52945 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDX1P52945 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
PDX1P52945 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PDX1P52945 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.18□□□□□ -1.74
PDX1P52945 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.18□□□□□ -1.74
PDX1P52945 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 AC000123.3-201ENST00000624029 4975 ntBASIC4.18□□□□□ -1.74
PDX1P52945 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.18□□□□□ -1.74
PDX1P52945 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDX1P52945 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.18□□□□□ -1.74
PDX1P52945 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.18□□□□□ -1.74
PDX1P52945 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDX1P52945 RNU1-85P-201ENST00000364127 164 ntBASIC4.18□□□□□ -1.74
PDX1P52945 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.18□□□□□ -1.74
PDX1P52945 MTCO1P56-201ENST00000401674 224 ntBASIC4.18□□□□□ -1.74
PDX1P52945 RNU4-22P-201ENST00000411058 166 ntBASIC4.18□□□□□ -1.74
PDX1P52945 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.18□□□□□ -1.74
PDX1P52945 TRGV6-201ENST00000417928 299 ntBASIC4.18□□□□□ -1.74
PDX1P52945 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.18□□□□□ -1.74
PDX1P52945 OR5AW1P-201ENST00000426334 1006 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL009174.1-201ENST00000426577 416 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL117339.2-201ENST00000430475 180 ntBASIC4.18□□□□□ -1.74
PDX1P52945 RPL23AP25-201ENST00000430973 463 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.18□□□□□ -1.74
PDX1P52945 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.18□□□□□ -1.74
PDX1P52945 UBE2V1P3-201ENST00000439651 417 ntBASIC4.18□□□□□ -1.74
PDX1P52945 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.18□□□□□ -1.74
PDX1P52945 GEMIN8P3-201ENST00000445417 720 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC005008.1-201ENST00000456151 612 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.18□□□□□ -1.74
PDX1P52945 AC090013.1-201ENST00000485147 480 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC134050.1-201ENST00000495088 933 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.18□□□□□ -1.74
PDX1P52945 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.18□□□□□ -1.74
PDX1P52945 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.18□□□□□ -1.74
PDX1P52945 RNA5SP49-201ENST00000516450 115 ntBASIC4.18□□□□□ -1.74
PDX1P52945 snoZ278.1-201ENST00000517059 112 ntBASIC4.18□□□□□ -1.74
PDX1P52945 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDX1P52945 MTCO3P15-201ENST00000526563 574 ntBASIC4.18□□□□□ -1.74
PDX1P52945 LRRC6P1-201ENST00000532188 885 ntBASIC4.18□□□□□ -1.74
PDX1P52945 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.18□□□□□ -1.74
PDX1P52945 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDX1P52945 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 SLC25A36P1-201ENST00000590111 465 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC233280.2-201ENST00000603917 1070 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL354984.3-201ENST00000604803 325 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL450336.1-201ENST00000605180 586 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms