Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OSTCP5-201ENST00000425293 453 ntBASIC4.95□□□□□ -1.62
MSH6P52701 AC006028.1-201ENST00000438379 402 ntBASIC4.95□□□□□ -1.62
MSH6P52701 NPM1P39-201ENST00000449818 867 ntBASIC4.95□□□□□ -1.62
MSH6P52701 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MSH6P52701 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.95□□□□□ -1.62
MSH6P52701 AC090877.1-201ENST00000561418 344 ntBASIC4.95□□□□□ -1.62
MSH6P52701 AL033523.1-201ENST00000605153 153 ntBASIC4.95□□□□□ -1.62
MSH6P52701 AC015849.6-201ENST00000605454 474 ntBASIC4.95□□□□□ -1.62
MSH6P52701 AC124312.4-201ENST00000605533 310 ntBASIC4.95□□□□□ -1.62
MSH6P52701 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.95□□□□□ -1.62
MSH6P52701 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.95□□□□□ -1.62
MSH6P52701 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.95□□□□□ -1.62
MSH6P52701 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH6P52701 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH6P52701 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MSH6P52701 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.95□□□□□ -1.62
MSH6P52701 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH6P52701 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSH6P52701 ARF4P3-201ENST00000397387 509 ntBASIC4.94□□□□□ -1.62
MSH6P52701 MTND4LP20-201ENST00000402379 270 ntBASIC4.94□□□□□ -1.62
MSH6P52701 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH6P52701 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH6P52701 AC025750.2-201ENST00000442609 450 ntBASIC4.94□□□□□ -1.62
MSH6P52701 MTND6P32-201ENST00000457611 483 ntBASIC4.94□□□□□ -1.62
MSH6P52701 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.94□□□□□ -1.62
MSH6P52701 AC025445.1-201ENST00000502728 300 ntBASIC4.94□□□□□ -1.62
MSH6P52701 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.94□□□□□ -1.62
MSH6P52701 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSH6P52701 EIF4EP5-201ENST00000528228 640 ntBASIC4.94□□□□□ -1.62
MSH6P52701 AC113192.3-201ENST00000529152 742 ntBASIC4.94□□□□□ -1.62
MSH6P52701 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH6P52701 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH6P52701 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.94□□□□□ -1.62
MSH6P52701 CKS1BP3-201ENST00000600888 237 ntBASIC4.94□□□□□ -1.62
MSH6P52701 AL158196.1-201ENST00000616786 434 ntBASIC4.94□□□□□ -1.62
MSH6P52701 AL590240.3-201ENST00000621416 943 ntBASIC4.94□□□□□ -1.62
MSH6P52701 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
MSH6P52701 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH6P52701 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH6P52701 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MSH6P52701 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MSH6P52701 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH6P52701 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH6P52701 AL356274.2-201ENST00000624379 3752 ntBASIC4.94□□□□□ -1.62
MSH6P52701 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MSH6P52701 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.93□□□□□ -1.62
MSH6P52701 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH6P52701 MIR448-201ENST00000362131 111 ntBASIC4.93□□□□□ -1.62
MSH6P52701 RNU6-7-201ENST00000364784 107 ntBASIC4.93□□□□□ -1.62
MSH6P52701 RNU6-8-201ENST00000365467 107 ntBASIC4.93□□□□□ -1.62
MSH6P52701 KCTD9P3-201ENST00000434597 1169 ntBASIC4.93□□□□□ -1.62
MSH6P52701 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.93□□□□□ -1.62
MSH6P52701 AC104984.5-201ENST00000586878 94 ntBASIC4.93□□□□□ -1.62
MSH6P52701 RPL12P50-201ENST00000603116 116 ntBASIC4.93□□□□□ -1.62
MSH6P52701 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.93□□□□□ -1.62
MSH6P52701 MIR7106-201ENST00000612419 65 ntBASIC4.93□□□□□ -1.62
MSH6P52701 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.93□□□□□ -1.62
MSH6P52701 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.93□□□□□ -1.62
MSH6P52701 AC093535.2-201ENST00000624769 2326 ntBASIC4.93□□□□□ -1.62
MSH6P52701 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MSH6P52701 AC087190.4-201ENST00000574616 8334 ntBASIC4.93□□□□□ -1.62
MSH6P52701 UBE3AP2-201ENST00000429033 2259 ntBASIC4.93□□□□□ -1.62
MSH6P52701 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.93□□□□□ -1.62
MSH6P52701 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.93□□□□□ -1.62
MSH6P52701 AL365361.1-201ENST00000566942 3481 ntBASIC4.93□□□□□ -1.62
MSH6P52701 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MSH6P52701 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH6P52701 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
MSH6P52701 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MSH6P52701 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.92□□□□□ -1.62
MSH6P52701 RPL5P18-201ENST00000406671 891 ntBASIC4.92□□□□□ -1.62
MSH6P52701 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.92□□□□□ -1.62
MSH6P52701 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.92□□□□□ -1.62
MSH6P52701 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
MSH6P52701 AC135999.1-201ENST00000478962 479 ntBASIC4.92□□□□□ -1.62
MSH6P52701 AC006445.1-201ENST00000491925 405 ntBASIC4.92□□□□□ -1.62
MSH6P52701 AC112184.1-201ENST00000505179 312 ntBASIC4.92□□□□□ -1.62
MSH6P52701 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.92□□□□□ -1.62
MSH6P52701 CR383656.14-201ENST00000551951 406 ntBASIC4.92□□□□□ -1.62
MSH6P52701 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.92□□□□□ -1.62
MSH6P52701 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.92□□□□□ -1.62
MSH6P52701 AP003355.3-201ENST00000623465 114 ntBASIC4.92□□□□□ -1.62
MSH6P52701 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.92□□□□□ -1.62
MSH6P52701 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MSH6P52701 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MSH6P52701 MTCO1P22-201ENST00000604619 1360 ntBASIC4.92□□□□□ -1.62
MSH6P52701 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
MSH6P52701 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
MSH6P52701 RN7SKP111-201ENST00000410349 271 ntBASIC4.91□□□□□ -1.62
MSH6P52701 RNA5SP104-201ENST00000410989 118 ntBASIC4.91□□□□□ -1.62
MSH6P52701 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.91□□□□□ -1.62
MSH6P52701 RNU7-157P-201ENST00000459600 66 ntBASIC4.91□□□□□ -1.62
MSH6P52701 KC877373.1-201ENST00000479066 408 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.91□□□□□ -1.62
MSH6P52701 IGKV2-26-201ENST00000518305 343 ntBASIC4.91□□□□□ -1.62
MSH6P52701 MIR4276-201ENST00000584832 70 ntBASIC4.91□□□□□ -1.62
MSH6P52701 MIR6715A-201ENST00000615929 79 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AC074276.2-201ENST00000619891 348 ntBASIC4.91□□□□□ -1.62
MSH6P52701 AC110801.1-201ENST00000623590 212 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms