Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 RNA5SP22-201ENST00000365393 109 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 PPIAP31-201ENST00000405422 495 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC009965.2-201ENST00000425328 970 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 ELOCP11-201ENST00000436690 332 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 RPL23AP46-201ENST00000438548 490 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AC122718.1-201ENST00000439448 744 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN3P51790 ELOCP16-201ENST00000444494 332 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 MTCYBP11-201ENST00000447254 1109 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AL162151.2-201ENST00000448875 158 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 FAM133DP-201ENST00000464802 691 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AC091959.2-201ENST00000477363 321 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AC073522.1-201ENST00000483312 377 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC079203.1-201ENST00000487972 404 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 ARL4AP1-201ENST00000503220 705 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC093752.1-206ENST00000511823 336 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN3P51790 AGGF1P6-201ENST00000569213 976 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 AC115085.1-201ENST00000588924 229 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 Z99289.3-201ENST00000605586 594 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 RNU4-89P-201ENST00000607443 133 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 SNORD91B-202ENST00000608459 222 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 VN1R74P-201ENST00000613259 503 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCN3P51790 AL138721.1-201ENST00000616756 179 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AC018926.3-201ENST00000618841 406 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AL161637.1-201ENST00000622380 412 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AC019278.1-201ENST00000623516 479 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCN3P51790 IQCB2P-201ENST00000401788 1633 ntBASIC4.63□□□□□ -1.67
CLCN3P51790 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCN3P51790 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCN3P51790 MAPK10-349ENST00000641767 3661 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLCN3P51790 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCN3P51790 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CLCN3P51790 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCN3P51790 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCN3P51790 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCN3P51790 RN7SKP280-201ENST00000364196 304 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 RNU4-51P-201ENST00000364206 140 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 MCTS2P-201ENST00000394552 546 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AF228730.1-201ENST00000397972 663 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC009237.10-201ENST00000414112 510 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCN3P51790 AC108032.1-201ENST00000416706 207 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCN3P51790 AC234782.4-201ENST00000417646 1048 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC114814.2-201ENST00000419195 485 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN3P51790 RPL21P110-201ENST00000433345 446 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 GTF2IP3-201ENST00000433887 494 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCN3P51790 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN3P51790 ABCF2P2-201ENST00000450549 296 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCN3P51790 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN3P51790 RNA5SP246-201ENST00000458909 119 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 RN7SL604P-201ENST00000492589 296 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN3P51790 AC020699.1-201ENST00000505161 445 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.62□□□□□ -1.67
CLCN3P51790 AC108064.1-201ENST00000513791 460 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 RNA5SP360-201ENST00000516555 118 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 RN7SKP283-201ENST00000517197 270 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 HMGB1P23-201ENST00000518743 568 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCN3P51790 MTND2P38-201ENST00000522536 667 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 IGJP1-201ENST00000522682 475 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 DEFB130C-202ENST00000530001 230 ntBASIC4.62□□□□□ -1.67
CLCN3P51790 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms