Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.63□□□□□ -1.83
RFC3P40938 AC107398.1-201ENST00000486904 505 ntBASIC3.63□□□□□ -1.83
RFC3P40938 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 AC017037.1-201ENST00000508460 471 ntBASIC3.63□□□□□ -1.83
RFC3P40938 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.63□□□□□ -1.83
RFC3P40938 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.63□□□□□ -1.83
RFC3P40938 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.63□□□□□ -1.83
RFC3P40938 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 AC079171.1-201ENST00000568788 914 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.63□□□□□ -1.83
RFC3P40938 AC067852.4-201ENST00000590314 478 ntBASIC3.63□□□□□ -1.83
RFC3P40938 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 AL391261.4-201ENST00000616012 481 ntBASIC3.63□□□□□ -1.83
RFC3P40938 MIR7702-201ENST00000621931 59 ntBASIC3.63□□□□□ -1.83
RFC3P40938 LINC00216-201ENST00000623548 1126 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AC112200.1-201ENST00000625015 234 ntBASIC3.63□□□□□ -1.83
RFC3P40938 AC009452.1-201ENST00000640823 606 ntBASIC3.63□□□□□ -1.83
RFC3P40938 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFC3P40938 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.63□□□□□ -1.83
RFC3P40938 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC3P40938 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC3P40938 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.62□□□□□ -1.83
RFC3P40938 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RFC3P40938 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC3P40938 EXOC5P1-201ENST00000510543 1969 ntBASIC3.62□□□□□ -1.83
RFC3P40938 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
RFC3P40938 RNA5SP399-201ENST00000364003 117 ntBASIC3.62□□□□□ -1.83
RFC3P40938 RNU6ATAC-201ENST00000408749 126 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC3P40938 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC3P40938 AC007688.1-201ENST00000475592 759 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AL139099.1-201ENST00000497398 403 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC3P40938 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.62□□□□□ -1.83
RFC3P40938 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 SNORA70.14-201ENST00000516205 110 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC3P40938 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC3P40938 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.62□□□□□ -1.83
RFC3P40938 MTND4LP24-201ENST00000572277 291 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
RFC3P40938 AC115085.1-201ENST00000588924 229 ntBASIC3.62□□□□□ -1.83
RFC3P40938 MTCO3P22-201ENST00000603219 784 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AL133247.2-201ENST00000603236 482 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.62□□□□□ -1.83
RFC3P40938 AC009032.1-201ENST00000617574 431 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AP004607.9-201ENST00000618202 316 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AC095038.2-201ENST00000621464 1070 ntBASIC3.62□□□□□ -1.83
RFC3P40938 CR392039.5-201ENST00000623201 510 ntBASIC3.62□□□□□ -1.83
RFC3P40938 AC073530.2-201ENST00000623987 261 ntBASIC3.62□□□□□ -1.83
RFC3P40938 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC3P40938 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RFC3P40938 TNPO1P3-201ENST00000436471 2662 ntBASIC3.62□□□□□ -1.83
RFC3P40938 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC3P40938 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.61□□□□□ -1.83
RFC3P40938 AP002001.2-201ENST00000529025 1469 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AL136964.1-201ENST00000622038 2990 ntBASIC3.61□□□□□ -1.83
RFC3P40938 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC3P40938 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFC3P40938 RNA5SP124-201ENST00000362739 110 ntBASIC3.61□□□□□ -1.83
RFC3P40938 RNU1-85P-201ENST00000364127 164 ntBASIC3.61□□□□□ -1.83
RFC3P40938 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
RFC3P40938 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC3P40938 Z97055.1-201ENST00000419730 712 ntBASIC3.61□□□□□ -1.83
RFC3P40938 USP12PY-201ENST00000427677 1064 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AC007389.2-201ENST00000434630 306 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AC009263.1-201ENST00000441193 1239 ntBASIC3.61□□□□□ -1.83
RFC3P40938 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC3P40938 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFC3P40938 RAD23BP3-201ENST00000454157 1152 ntBASIC3.61□□□□□ -1.83
RFC3P40938 RPL30P11-201ENST00000495304 339 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AC025554.1-201ENST00000505641 188 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AC108157.1-201ENST00000510511 539 ntBASIC3.61□□□□□ -1.83
RFC3P40938 RNU6-889P-201ENST00000517189 103 ntBASIC3.61□□□□□ -1.83
RFC3P40938 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.61□□□□□ -1.83
RFC3P40938 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC3P40938 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.61□□□□□ -1.83
RFC3P40938 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC3P40938 OR4A2P-201ENST00000527276 913 ntBASIC3.61□□□□□ -1.83
RFC3P40938 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RFC3P40938 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC3P40938 AC091516.1-201ENST00000549191 703 ntBASIC3.61□□□□□ -1.83
RFC3P40938 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.61□□□□□ -1.83
RFC3P40938 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
RFC3P40938 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.61□□□□□ -1.83
RFC3P40938 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.61□□□□□ -1.83
RFC3P40938 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms