Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RPS3AP9-201ENST00000417027 792 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.42□□□□□ -1.7
CTNNA1P35221 RPL23AP1-201ENST00000428990 471 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AC007688.1-201ENST00000475592 759 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AL592156.1-201ENST00000508758 304 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC005921.1-201ENST00000510589 286 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC005798.1-201ENST00000513715 387 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 RNU2-58P-201ENST00000516403 183 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 RNA5SP73-201ENST00000516744 108 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AP004242.1-201ENST00000533701 349 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC063950.1-201ENST00000552036 308 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AC007599.1-201ENST00000568688 1174 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC010928.3-201ENST00000587712 541 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 RPL12P25-202ENST00000598100 674 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AC005776.1-201ENST00000603164 290 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 AP004247.3-201ENST00000608682 624 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTNNA1P35221 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.42□□□□□ -1.7
CTNNA1P35221 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTNNA1P35221 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.41□□□□□ -1.7
CTNNA1P35221 AL157700.1-201ENST00000561973 1432 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA1P35221 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA1P35221 SNORA37-201ENST00000384504 129 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 EIF5P1-201ENST00000400019 1231 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 UBE2V1P9-201ENST00000414760 368 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 LYPLA1P1-201ENST00000434514 622 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 TPTE2P3-201ENST00000441562 1189 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.41□□□□□ -1.7
CTNNA1P35221 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.41□□□□□ -1.7
CTNNA1P35221 GXYLT1P1-201ENST00000446657 490 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AL133477.1-201ENST00000457472 514 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 RPL35AP28-201ENST00000459730 331 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 RN7SL98P-201ENST00000462271 300 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 NCOR1P1-202ENST00000486162 291 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC005726.1-201ENST00000494679 427 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 RNU6-334P-201ENST00000517072 102 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.41□□□□□ -1.7
CTNNA1P35221 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.41□□□□□ -1.7
CTNNA1P35221 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.41□□□□□ -1.7
CTNNA1P35221 BPTFP1-201ENST00000579209 492 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 OR4G1P-201ENST00000588632 938 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.41□□□□□ -1.7
CTNNA1P35221 AC007687.1-201ENST00000602704 304 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AP002906.1-201ENST00000603405 233 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 MIR7703-201ENST00000620784 77 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AL359715.5-201ENST00000623431 443 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AL590396.4-201ENST00000636779 956 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 MFSD8-216ENST00000641147 4009 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 AC095050.2-201ENST00000510748 1458 ntBASIC4.41□□□□□ -1.7
CTNNA1P35221 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
CTNNA1P35221 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA1P35221 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTNNA1P35221 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.4□□□□□ -1.7
CTNNA1P35221 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.4□□□□□ -1.7
CTNNA1P35221 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA1P35221 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA1P35221 Y_RNA.110-201ENST00000363220 99 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 RNA5SP189-201ENST00000364920 115 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.4□□□□□ -1.71
CTNNA1P35221 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.4□□□□□ -1.71
CTNNA1P35221 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTNNA1P35221 SNORA3C-201ENST00000408792 125 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.4□□□□□ -1.71
CTNNA1P35221 MFSD13B-201ENST00000420133 1290 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 COX6CP15-201ENST00000426313 211 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA1P35221 DEFB130D-201ENST00000426866 237 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA1P35221 PHBP16-201ENST00000446318 950 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 NPM1P49-201ENST00000448027 714 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA1P35221 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.4□□□□□ -1.71
CTNNA1P35221 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.4□□□□□ -1.71
CTNNA1P35221 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA1P35221 RPS29P19-201ENST00000479709 171 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 AC092451.1-201ENST00000480211 153 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA1P35221 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.4□□□□□ -1.71
CTNNA1P35221 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTNNA1P35221 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.4□□□□□ -1.71
CTNNA1P35221 IGLVIV-65-201ENST00000517313 360 ntBASIC4.4□□□□□ -1.71
CTNNA1P35221 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms